Gene detail information of Glyur000086s00011529.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G29260.15.00E-161peroxin 7
NRXP_004485898.10PREDICTED: peroxisome biogenesis protein 7-like [Cicer arietinum]
COGYP_007115634.12.00E-22WD-40 repeat-containing protein [Oscillatoria nigro-viridis PCC 7112]
Swissprottr|Q9XF57|PEX7_ARATH0Peroxisome biogenesis protein 7
trEMBLtr|I1M1T5|I1M1T5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30230.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00086213158214114-


Gene family

Gene familysubfamily
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011529.1PF00400.27WD40981350.00032
Glyur000086s00011529.1PF00400.27WD401421797.80E-07
Glyur000086s00011529.1PF00400.27WD401872222.20E-07
Glyur000086s00011529.1PF00400.27WD402282661.10E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.459
SRR1783600control38.715
SRR1783602moderate drought stress29.215
SRR1811619moderate drought stress29.388

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.846
DRR006520Root Summer glycyrrhizin high producing strain22.353
DRR006521Root Winter glycyrrhizin high producing strain49.838
DRR006522Root Winter glycyrrhizin high producing strain48.568
DRR006523Root Summer glycyrrhizin low producing strain30.816
DRR006524Root Summer glycyrrhizin low producing strain29.566
DRR006525Leaf Summer glycyrrhizin high producing strain21.923
DRR006526Leaf Summer glycyrrhizin high producing strain22.116

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.662
SRR2868004Drought Stress(Tissue:root)37.387
SRR2967015Control (Tissue:root)38.010

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.126
SRR9715740Leave49.091
SRR9715741Leave26.093
SRR9715739Root36.255
SRR9715742Root30.627
SRR9715743Root29.308

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h67.051
SRR8749028MeJA induced 9h59.526
SRR8749029MeJA induced 9h39.643
SRR8749030Uninduced11.509
SRR8749031Uninduced6.025
SRR8749032Uninduced15.061

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.040
SRR8400027Control-Root29.853

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved