Gene detail information of Glyur000086s00011536.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G29160.12.00E-40Dof-type zinc finger DNA-binding family protein
NRXP_003546029.15.82E-63PREDICTED: dof zinc finger protein DOF1.5-like [Glycine max]
Swissprottr|P68350|DOF15_ARATH2.00E-50Dof zinc finger protein DOF1.5
trEMBLtr|I1MER9|I1MER9_SOYBN2.00E-63Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G08860.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00086282370284110+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011536.1PF02701.10zf-Dof461033.10E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.548
SRR1783600control26.226
SRR1783602moderate drought stress17.932
SRR1811619moderate drought stress17.726

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain64.238
DRR006520Root Summer glycyrrhizin high producing strain62.606
DRR006521Root Winter glycyrrhizin high producing strain0.103
DRR006522Root Winter glycyrrhizin high producing strain0.099
DRR006523Root Summer glycyrrhizin low producing strain54.763
DRR006524Root Summer glycyrrhizin low producing strain56.203
DRR006525Leaf Summer glycyrrhizin high producing strain1.106
DRR006526Leaf Summer glycyrrhizin high producing strain1.198

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.070
SRR2868004Drought Stress(Tissue:root)14.666
SRR2967015Control (Tissue:root)16.015

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.887
SRR9715740Leave1.502
SRR9715741Leave0.625
SRR9715739Root9.460
SRR9715742Root6.223
SRR9715743Root5.923

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.064
SRR8749028MeJA induced 9h4.220
SRR8749029MeJA induced 9h4.210
SRR8749030Uninduced1.721
SRR8749031Uninduced0.444
SRR8749032Uninduced1.047

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.940
SRR8400027Control-Root28.488

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved