Gene detail information of Glyur000086s00011538.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01070.1 | 3.00E-81 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_002281768.1 | 9.91E-166 | PREDICTED: anthocyanidin 3-O-glucosyltransferase 5 [Vitis vinifera] |
| Swissprot | tr|Q40287|UFOG5_MANES | 2.00E-113 | Anthocyanidin 3-O-glucosyltransferase 5 |
| trEMBL | tr|E0CQ07|E0CQ07_VITVI | 4.00E-166 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI19653.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00086 | 290900 | 292171 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000086s00011538.1 | PF00201.13 | UDPGT | 263 | 408 | 1.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.716 |
| SRR1783600 | control | 0.752 |
| SRR1783602 | moderate drought stress | 0.317 |
| SRR1811619 | moderate drought stress | 0.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.809 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.967 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.778 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.780 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.110 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.258 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.007 |
| SRR2967015 | Control (Tissue:root) | 12.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.013 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.051 |
| SRR9715739 | Root | 1.014 |
| SRR9715742 | Root | 0.904 |
| SRR9715743 | Root | 1.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.112 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.050 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.581 |
| SRR8400027 | Control-Root | 5.574 |