Gene detail information of Glyur000087s00008532.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67030.10zeaxanthin epoxidase (ZEP) (ABA1)
NRXP_004511928.10PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cicer arietinum]
COGYP_631595.14.00E-56FAD-dependent oxidoreductase [Myxococcus xanthus DK 1622]
Swissprottr|O81360|ABA2_PRUAR0Zeaxanthin epoxidase, chloroplastic (Precursor)
trEMBLtr|I1LHE5|I1LHE5_SOYBN0Zeaxanthin epoxidase, chloroplastic {ECO:0000256|PIRNR:PIRNR036989}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0008735215808-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09838ZEP, ABA1 EC:1.14.15.21 Carotenoid biosynthesis map00906


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0005515  protein binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000087s00008532.1PF01494.14FAD_binding_3884362.90E-15
Glyur000087s00008532.1PF00498.21FHA5346102.10E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.951
SRR1783600control6.539
SRR1783602moderate drought stress8.262
SRR1811619moderate drought stress8.024

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.006
DRR006520Root Summer glycyrrhizin high producing strain10.332
DRR006521Root Winter glycyrrhizin high producing strain18.090
DRR006522Root Winter glycyrrhizin high producing strain18.089
DRR006523Root Summer glycyrrhizin low producing strain15.270
DRR006524Root Summer glycyrrhizin low producing strain15.261
DRR006525Leaf Summer glycyrrhizin high producing strain32.069
DRR006526Leaf Summer glycyrrhizin high producing strain32.059

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.739
SRR2868004Drought Stress(Tissue:root)39.809
SRR2967015Control (Tissue:root)36.646

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave49.890
SRR9715740Leave52.049
SRR9715741Leave36.018
SRR9715739Root6.277
SRR9715742Root15.047
SRR9715743Root12.143

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.733
SRR8749028MeJA induced 9h18.254
SRR8749029MeJA induced 9h6.925
SRR8749030Uninduced2.985
SRR8749031Uninduced1.680
SRR8749032Uninduced1.774

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.866
SRR8400027Control-Root24.969

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved