Gene detail information of Glyur000087s00008543.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01540.24.00E-75Protein kinase superfamily protein
NRXP_003539357.11.96E-142PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Glycine max]
COGYP_006807242.12.00E-08serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358]
Swissprottr|Q3EDL4|Y1154_ARATH3.00E-102Probable serine/threonine-protein kinase At1g01540
trEMBLtr|I1LHD5|I1LHD5_SOYBN7.00E-143Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G05830.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000878515588724-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000087s00008543.1PF07714.12Pkinase_Tyr4812.50E-09
Glyur000087s00008543.1PF07714.12Pkinase_Tyr821851.20E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.913
SRR1783600control50.020
SRR1783602moderate drought stress47.726
SRR1811619moderate drought stress47.809

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain45.780
DRR006520Root Summer glycyrrhizin high producing strain45.202
DRR006521Root Winter glycyrrhizin high producing strain59.196
DRR006522Root Winter glycyrrhizin high producing strain57.639
DRR006523Root Summer glycyrrhizin low producing strain34.886
DRR006524Root Summer glycyrrhizin low producing strain35.652
DRR006525Leaf Summer glycyrrhizin high producing strain27.975
DRR006526Leaf Summer glycyrrhizin high producing strain27.912

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.510
SRR2868004Drought Stress(Tissue:root)42.309
SRR2967015Control (Tissue:root)40.473

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.822
SRR9715740Leave25.826
SRR9715741Leave20.823
SRR9715739Root27.668
SRR9715742Root49.171
SRR9715743Root43.208

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.103
SRR8749028MeJA induced 9h12.809
SRR8749029MeJA induced 9h7.017
SRR8749030Uninduced7.534
SRR8749031Uninduced2.763
SRR8749032Uninduced2.638

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root67.738
SRR8400027Control-Root83.206

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved