Gene detail information of Glyur000087s00008552.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23380.10SET domain-containing protein
NRKHN42097.10Histone-lysine N-methyltransferase CLF [Glycine soja]
COGYP_002763429.12.00E-11hypothetical protein GAU_3917 [Gemmatimonas aurantiaca T-27]
Swissprottr|P93831|CLF_ARATH0Histone-lysine N-methyltransferase CLF
trEMBLtr|I1LHC7|I1LHC7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G05760.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00087156466164836-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11430EZH2 EC:2.1.1.43 Lysine degradation map00310
MicroRNAs in cancermap05206


Gene Ontology

cellular_component

GO:0031519  PcG protein complex


molecular_function

GO:0003682  chromatin binding

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000087s00008552.1PF00856.23SET7238601.70E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.952
SRR1783600control3.876
SRR1783602moderate drought stress3.031
SRR1811619moderate drought stress3.059

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.469
DRR006520Root Summer glycyrrhizin high producing strain4.757
DRR006521Root Winter glycyrrhizin high producing strain4.162
DRR006522Root Winter glycyrrhizin high producing strain4.226
DRR006523Root Summer glycyrrhizin low producing strain3.337
DRR006524Root Summer glycyrrhizin low producing strain3.408
DRR006525Leaf Summer glycyrrhizin high producing strain3.682
DRR006526Leaf Summer glycyrrhizin high producing strain3.776

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.760
SRR2868004Drought Stress(Tissue:root)15.334
SRR2967015Control (Tissue:root)14.775

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.101
SRR9715740Leave4.348
SRR9715741Leave5.487
SRR9715739Root1.240
SRR9715742Root3.487
SRR9715743Root3.634

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.939
SRR8749028MeJA induced 9h19.350
SRR8749029MeJA induced 9h16.071
SRR8749030Uninduced9.879
SRR8749031Uninduced10.037
SRR8749032Uninduced7.788

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.384
SRR8400027Control-Root11.757

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved