Gene detail information of Glyur000087s00008555.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36920.22.00E-97Integrase-type DNA-binding superfamily protein
NRXP_007155905.10hypothetical protein PHAVU_003G241900g [Phaseolus vulgaris]
Swissprottr|P47927|AP2_ARATH1.00E-131Floral homeotic protein APETALA 2
trEMBLtr|V7CCN3|V7CCN3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27899.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00087192857196791-


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2
EAR motif-containing ProteinsAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000087s00008555.1PF00847.15AP21722212.20E-14
Glyur000087s00008555.1PF00847.15AP22643142.20E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control35.585
SRR1783600control35.529
SRR1783602moderate drought stress45.959
SRR1811619moderate drought stress45.840

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.120
DRR006520Root Summer glycyrrhizin high producing strain29.663
DRR006521Root Winter glycyrrhizin high producing strain5.807
DRR006522Root Winter glycyrrhizin high producing strain5.562
DRR006523Root Summer glycyrrhizin low producing strain30.579
DRR006524Root Summer glycyrrhizin low producing strain30.826
DRR006525Leaf Summer glycyrrhizin high producing strain18.307
DRR006526Leaf Summer glycyrrhizin high producing strain18.218

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.754
SRR2868004Drought Stress(Tissue:root)53.871
SRR2967015Control (Tissue:root)64.390

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.122
SRR9715740Leave20.550
SRR9715741Leave13.767
SRR9715739Root4.148
SRR9715742Root16.508
SRR9715743Root14.445

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.884
SRR8749028MeJA induced 9h16.010
SRR8749029MeJA induced 9h19.231
SRR8749030Uninduced14.348
SRR8749031Uninduced6.418
SRR8749032Uninduced8.441

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.462
SRR8400027Control-Root26.101

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved