Gene detail information of Glyur000087s00008564.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67230.12.00E-161Nucleotide-diphospho-sugar transferases superfamily protein
NRXP_004511893.10PREDICTED: probable beta-1,4-xylosyltransferase IRX14-like [Cicer arietinum]
Swissprottr|Q9FH90|IX14H_ARATH0Probable beta-1,4-xylosyltransferase IRX14H
trEMBLtr|I1LHB1|I1LHB1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G05640.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00087257256261494+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0015018  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000087s00008564.1PF03360.11Glyco_transf_431784197.60E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.912
SRR1783600control24.068
SRR1783602moderate drought stress16.340
SRR1811619moderate drought stress16.260

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.653
DRR006520Root Summer glycyrrhizin high producing strain22.721
DRR006521Root Winter glycyrrhizin high producing strain12.651
DRR006522Root Winter glycyrrhizin high producing strain12.701
DRR006523Root Summer glycyrrhizin low producing strain28.707
DRR006524Root Summer glycyrrhizin low producing strain28.717
DRR006525Leaf Summer glycyrrhizin high producing strain8.898
DRR006526Leaf Summer glycyrrhizin high producing strain8.939

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.264
SRR2868004Drought Stress(Tissue:root)24.068
SRR2967015Control (Tissue:root)27.741

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.980
SRR9715740Leave13.643
SRR9715741Leave13.013
SRR9715739Root44.089
SRR9715742Root48.604
SRR9715743Root44.385

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.539
SRR8749028MeJA induced 9h8.667
SRR8749029MeJA induced 9h6.821
SRR8749030Uninduced8.016
SRR8749031Uninduced3.133
SRR8749032Uninduced3.860

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.787
SRR8400027Control-Root30.493

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved