Gene detail

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Gene detail information of Glyur000087s00008575.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23450.2	5.00E-164	Protein kinase superfamily protein
NR	XP_004511986.1	0	PREDICTED: wall-associated receptor kinase-like 14-like [Cicer arietinum]
COG	YP_001958461.1	2.00E-22	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q8RY67\|WAKLO_ARATH	0	Wall-associated receptor kinase-like 14 (Precursor)
trEMBL	tr\|G7K9G5\|G7K9G5_MEDTR	0	Wall associated kinase-like protein {ECO:0000313\|EMBL:AES94808.1}

Sequence

Transcript Sequence

>Glyur000087s00008575.1
ATGTTTCTTCATCACAAGATAAATTTGGCAACAGTGATCACAACAATCTTGTTGTTGTGCACAACAAGAGCGCAAAAAAACGTCACAAATTGCCAGAACTTTTGTGGAGGGGGGGAACCCCTGCAGTACCCTTTTGGTTTCTCTGAAGGTTGTGGAATTCAGCTAAACTGTAACAACAGCAGAGTCCAAATTGGTGATTTTCTGGTCCAGAACATAACCAGCAGCAGCATATTCATCTATCTCCCTGCAAAATGCAACCGTAGCATGCAATCCATTTCTCCACTCTTCAGTGACAAATTTGCCCCCACACGGAACAATAGCTTTCTGGTGCAGAATTGCTCGGCTCCGCTTGGTGGCTGTGTTATTCCGGCTNCGAGTTTTTTGGGGAACCAGATTGAGGTTGAAAGCTGTGATAGCAAAAGTGGTAACATCAGTTGCTTCACACAGAAGCAGCATGATCAAGAGGTGGTTGATGTTTTGACATATGAGGAATTGAAGCAAACTNAGTGCAATTACTTGTTCTCTGCGGTTGCTTTTGCGCAGAGCAAAGAGCTTTCGCTGCAGTTTCAGGCTGTTGAGTTGGGGTGGTGGCTTCAAGGGTCTTGTGATCAATGCTTTCCCAACGCTACCTGCACAACGGTCCATCGCCAGGGAGGGGGCACTGGATTCCGGTGCCAGTGTCTCGATGGTTTCCAGGGTGATGGCTTCATCAACGGCACCGGTTGCTGGAGAGTAAATATTGTCATCTTTTTAATTCTGTGTATGGTTACTGCCTTGTCATCAGCTCCAAGCTCAAGCTGCAGTGCTTCAACATTAACGTCTGGGGGATGTGGGAATGCAACCAAAATCGGTGTTGTCGTTGGAGTGATTGTAGCTGGAGTTTTGGTGGTGGCTGCTCTCATTCTTCTATGCTACTGTGTCAGGCGCCGTTCTACCTGGTTGAGAAAACATACCAGAGTAAAGCGCCTATTACGTGAAGCCGCAGGAAACTCTGTTGTGCCTCTCTACCCTTACAAGGAAATAGAAAAAGCCACAAATTCTTTCTCTGATAAACAAAGGCTGGGAACTGGGGCTTTCGGTACGGTTTATGCTGGAAAACTTCACAATGATGAGTGGGTTGCTATAAAGAAGATAAGGCATAGAGACACCAACAGTGTTGACCAAGTCATGAACGAGATCAAGCTCCTTTCTTCGGTGAGTCACCAGAATCTGGTTCGCCTCCTGGGTTGCTGCATTGAGGAGGGAGAGCAGATACTTGTTTATGAATATATGCCAAATGGAACACTATCTCAGCATTTGCAAAGAGAGAGGNGTCAAGGCCTTCCATGGACAATGCGACTTACCATTGCTTCTGAAACGGCTAATGCCATAGCATATCTCCATTCTGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCCAGTAACATACTCTTGGACTATAGCTTCAAATCTAAGGTAGCTGATTTTGGACTTTCTAGACTAGGCATGATGGAAACATCACATATCTCAACTGCCCCACAAGGGACTCCAGGCTATGTGGATCCCCAATACCACCAGAACTTCCACCTTTCTGATAAAAGTGATGTCTACAGCTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCCTGAAAGTGGTTGATTTCGGCCGGCCTCAGAGCGAGATTAACTTAGCTGCACTTGCTGTTGATAGGATTAGGAGAGGTTCTGTAGATGAGATCATAGATCCCTTCCTTGAACCACATAGAGATGCTTGGACACTGTATTCCATTCATAAGGTGGCTGAGCTTGCATTTAGATGCCTNGCTTTTCATAGCGACGCGAGGCCTACTATGATGGAAGTGGCTGAGGAGCTAGAACACATCAGGCGCAGTGGATGGGCAACTATGGAGGAAACCATATGCTTGGGTTCATCGGTTGGGTCCGCGAGTTCATCGCCTCACAATGGAAGTGAGAAGTCACTGAGTGGTATTATTAAGTTTAAGAAAGCAGGGCAAGGGGCTGAGGGATTGATTGTTCCACCCATGGATGAGAGCTTTTTGCATTCTGTGGAGGTGAAAGACTGCTCCCCTGTATCAGTGCATGATCCTTGGTCAAGTGGACAGAGCTCACCTTCAACAAACACCTTGTTGGGAAACGTCGTTCGGTGACATAAGCCTCCAGCAATGTGAATAATACTAAAGGCATATATAACAGTTTTTTTTTTTTTTCTCTTTCGCTGATATTGCTATAGATATTTTTTGTGTGCTTAAGAATTCTGCTTTACTAACAACTTCCAAAGCTTGGACGCAGAAATCATCAGCAATAGATATACAAAATTCTCTATGGGATGAAAAACTATGAATAATTACAATGTATTATCATGAATAGAAAAAGCCAACCAACACCTTAAGCTATTATTGTCTATTAAGTAAGCACAACTAAAGATAATTCTTTTGGTGTCTCGGTAATCTAAAATGCCTAATTTGACGCTATGGCTATATGTTGCGCCCATGTGTACGCGTTAACGCTGCTTCAGTTTAGTCTTTGTTGTTTGTCACTAAGCCTAACACTGCATATTCTGGCTCTGCCAGGTATTAATGACAGGAATGCTGGAGCCATGCCCTATTTTTGCTGCTTGTTTCCTCTTTGTTTTTCTCTCAAAATAAGATTGTTTCTATTTTTCTATTGATAATAATCACTCGATCCGGACTTGCGCTAATGTGCCATGTAATCAACACAAGTGTCTCGATTTTTCACACANGTCAGCAAATGTCATTTAAATTTCTTAATCATAGGTAGTTAATTATGATCAATGAAGAGGGCAAACAGATATATATTGCCCAAACACATAACAGTGGCAGACTTGTAAGCATTCAAGTGCCTCTTTACCTATACAGAGATTGTGTAGAAATAGTCATTTGAGNTAACAATTGCCATTGATATCAAGTTTTGGATCCTAATCTATAAGACTTGCACAATGTTTATGAATAAGCTTTGTGATGAACAAGAAAAAAAGGCAAGATGAGCAATGAGTTGTTTGTCTGTTCAGGTGTTGCTCACTGACAAATCTAACAAGTTACTGTAAAACAGTAAAAGAAAGTACTGTATGTTGTCATCTAACCATGACTTCTTGGATCCACAACTTGATGCACCTTTCTTGCCTCAGCACTTGAATACTGGCCTACAACACGTGCATGAGGCACCGATGCTTCTCCACGAGCAAGGGCATCCACATTTTCAAGCAGGTACTGTCTTGGAAGCCTACCCACCACATTGCCCTCCTCATTCCCTTCTTTATCAAGGAATGCAAAGTGTGGAATACCCTCCACNCCAAACTCGTCAAGCTCTTGCTCCCACTTTGTGTTATCAACATTCAACA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00087	315616	320837	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000087s00008575.1	PF00069.20	Pkinase	350	618	4.50E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.256
SRR1783600	control	5.216
SRR1783602	moderate drought stress	9.038
SRR1811619	moderate drought stress	9.083

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.219
DRR006520	Root Summer glycyrrhizin high producing strain	5.436
DRR006521	Root Winter glycyrrhizin high producing strain	10.914
DRR006522	Root Winter glycyrrhizin high producing strain	11.147
DRR006523	Root Summer glycyrrhizin low producing strain	8.457
DRR006524	Root Summer glycyrrhizin low producing strain	8.384
DRR006525	Leaf Summer glycyrrhizin high producing strain	18.621
DRR006526	Leaf Summer glycyrrhizin high producing strain	19.093

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	13.563
SRR2868004	Drought Stress(Tissue:root)	19.760
SRR2967015	Control (Tissue:root)	16.107

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	9.415
SRR9715740	Leave	17.128
SRR9715741	Leave	14.330
SRR9715739	Root	3.032
SRR9715742	Root	7.897
SRR9715743	Root	6.761

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.728
SRR8749028	MeJA induced 9h	35.972
SRR8749029	MeJA induced 9h	20.134
SRR8749030	Uninduced	45.835
SRR8749031	Uninduced	72.802
SRR8749032	Uninduced	44.854

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	12.724
SRR8400027	Control-Root	10.522