Gene detail information of Glyur000088s00007691.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01060.1 | 1.00E-77 | myb-like HTH transcriptional regulator family protein |
| NR | XP_004486394.1 | 0 | PREDICTED: myb family transcription factor APL-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 3.00E-50 | Protein PHR1-LIKE 1 |
| trEMBL | tr|K7LBB2|K7LBB2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G02040.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 28067 | 32825 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000088s00007691.1 | PF00249.26 | Myb_DNA-binding | 43 | 94 | 1.30E-17 |
| Glyur000088s00007691.1 | PF14379.1 | Myb_CC_LHEQLE | 127 | 175 | 1.40E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 71.395 |
| SRR1783600 | control | 71.726 |
| SRR1783602 | moderate drought stress | 81.383 |
| SRR1811619 | moderate drought stress | 80.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 126.894 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 124.959 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 76.631 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 74.216 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 99.953 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 100.015 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 98.455 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 98.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 119.362 |
| SRR2868004 | Drought Stress(Tissue:root) | 111.595 |
| SRR2967015 | Control (Tissue:root) | 110.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 114.912 |
| SRR9715740 | Leave | 155.663 |
| SRR9715741 | Leave | 125.809 |
| SRR9715739 | Root | 29.609 |
| SRR9715742 | Root | 53.987 |
| SRR9715743 | Root | 51.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 79.371 |
| SRR8749028 | MeJA induced 9h | 69.132 |
| SRR8749029 | MeJA induced 9h | 61.944 |
| SRR8749030 | Uninduced | 39.576 |
| SRR8749031 | Uninduced | 18.320 |
| SRR8749032 | Uninduced | 27.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 100.184 |
| SRR8400027 | Control-Root | 101.561 |