Gene detail information of Glyur000088s00007692.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24120.1 | 9.00E-51 | Homeodomain-like superfamily protein |
| NR | XP_004486388.1 | 0 | PREDICTED: uncharacterized protein LOC101503318 isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SAK5|APL_ARATH | 2.00E-45 | Myb family transcription factor APL |
| trEMBL | tr|I1L075|I1L075_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G02030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00088 | 37520 | 41808 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000088s00007692.1 | PF00249.26 | Myb_DNA-binding | 40 | 91 | 1.40E-18 |
| Glyur000088s00007692.1 | PF14379.1 | Myb_CC_LHEQLE | 134 | 182 | 2.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.920 |
| SRR1783600 | control | 35.204 |
| SRR1783602 | moderate drought stress | 31.599 |
| SRR1811619 | moderate drought stress | 31.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.587 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.871 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.819 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.499 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.286 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 53.888 |
| SRR2868004 | Drought Stress(Tissue:root) | 41.146 |
| SRR2967015 | Control (Tissue:root) | 40.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.217 |
| SRR9715740 | Leave | 20.482 |
| SRR9715741 | Leave | 22.061 |
| SRR9715739 | Root | 16.741 |
| SRR9715742 | Root | 17.373 |
| SRR9715743 | Root | 15.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.182 |
| SRR8749028 | MeJA induced 9h | 27.783 |
| SRR8749029 | MeJA induced 9h | 15.328 |
| SRR8749030 | Uninduced | 9.870 |
| SRR8749031 | Uninduced | 3.147 |
| SRR8749032 | Uninduced | 6.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 45.395 |
| SRR8400027 | Control-Root | 49.955 |