Gene detail information of Glyur000088s00007723.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47760.19.00E-902-phosphoglycolate phosphatase 2
NRXP_003534982.16.67E-130PREDICTED: phosphoglycolate phosphatase 2 isoform X1 [Glycine max]
COGNP_578161.13.00E-28sugar-catabolism phosphotransferase [Pyrococcus furiosus DSM 3638]
Swissprottr|Q8GWU0|PGP2_ARATH2.00E-111Phosphoglycolate phosphatase 2
trEMBLtr|K7LBA1|K7LBA1_SOYBN2.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G01810.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00088186093189314+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19269PGP, PGLP EC:3.1.3.18 3.1.3.48 Carbon metabolism map01200
Glyoxylate and dicarboxylate metabolismmap00630


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016791  phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000088s00007723.1PF13344.1Hydrolase_6431453.40E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.840
SRR1783600control8.812
SRR1783602moderate drought stress6.435
SRR1811619moderate drought stress6.315

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.788
DRR006520Root Summer glycyrrhizin high producing strain7.798
DRR006521Root Winter glycyrrhizin high producing strain28.955
DRR006522Root Winter glycyrrhizin high producing strain28.737
DRR006523Root Summer glycyrrhizin low producing strain6.657
DRR006524Root Summer glycyrrhizin low producing strain6.934
DRR006525Leaf Summer glycyrrhizin high producing strain9.802
DRR006526Leaf Summer glycyrrhizin high producing strain9.930

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.085
SRR2868004Drought Stress(Tissue:root)11.928
SRR2967015Control (Tissue:root)12.788

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.137
SRR9715740Leave12.906
SRR9715741Leave16.178
SRR9715739Root6.761
SRR9715742Root12.948
SRR9715743Root10.848

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.771
SRR8749028MeJA induced 9h30.349
SRR8749029MeJA induced 9h55.953
SRR8749030Uninduced64.867
SRR8749031Uninduced43.972
SRR8749032Uninduced79.271

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.801
SRR8400027Control-Root19.667

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved