Gene detail information of Glyur000089s00008785.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38800.14.00E-77methylthioadenosine nucleosidase 1
NRAIT39704.12.41E-1385'-methylthioadenosine nucleosidase [Robinia pseudoacacia]
COGYP_001984241.12.00E-19putative methylthioadenosine/S-adenosyl homocysteine nucleosidase [Cellvibrio japonicus Ueda107]
Swissprottr|Q9T0I8|MTN1_ARATH3.00E-1005'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1
trEMBLtr|A0A097GX12|A0A097GX12_ROBPS9.00E-1395'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:AIT39704.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0008997476101611-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01244MTN EC:3.2.2.16 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0009116  nucleoside metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000089s00008785.1PF01048.15PNP_UDP_1291405.10E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control95.168
SRR1783600control95.777
SRR1783602moderate drought stress71.555
SRR1811619moderate drought stress70.482

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain83.746
DRR006520Root Summer glycyrrhizin high producing strain84.646
DRR006521Root Winter glycyrrhizin high producing strain79.983
DRR006522Root Winter glycyrrhizin high producing strain76.425
DRR006523Root Summer glycyrrhizin low producing strain53.644
DRR006524Root Summer glycyrrhizin low producing strain54.065
DRR006525Leaf Summer glycyrrhizin high producing strain66.048
DRR006526Leaf Summer glycyrrhizin high producing strain67.509

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)107.721
SRR2868004Drought Stress(Tissue:root)95.889
SRR2967015Control (Tissue:root)95.703

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave82.271
SRR9715740Leave92.872
SRR9715741Leave107.670
SRR9715739Root79.100
SRR9715742Root81.925
SRR9715743Root78.363

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h145.795
SRR8749028MeJA induced 9h91.309
SRR8749029MeJA induced 9h110.595
SRR8749030Uninduced104.755
SRR8749031Uninduced87.354
SRR8749032Uninduced71.764

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root117.877
SRR8400027Control-Root107.326

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved