Gene detail information of Glyur000089s00008800.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G16570.10GLN phosphoribosyl pyrophosphate amidotransferase 1
NRXP_003534359.10PREDICTED: amidophosphoribosyltransferase 1, chloroplastic-like [Glycine max]
COGYP_593695.10amidophosphoribosyltransferase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|P52418|PUR1_SOYBN0Amidophosphoribosyltransferase, chloroplastic (Precursor)
trEMBLtr|I1L5G4|I1L5G4_SOYBN0Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00089173219174991+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00764purF, PPAT EC:2.4.2.14 Purine metabolism map00230
Alanine, aspartate and glutamate metabolismmap00250


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009113  purine nucleobase biosynthetic process

GO:0009116  nucleoside metabolic process


molecular_function

GO:0004044  amidophosphoribosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000089s00008800.1PF13537.1GATase_71733015.80E-26
Glyur000089s00008800.1PF00156.22Pribosyltran3604761.70E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.950
SRR1783600control1.964
SRR1783602moderate drought stress5.592
SRR1811619moderate drought stress5.589

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.202
DRR006520Root Summer glycyrrhizin high producing strain13.491
DRR006521Root Winter glycyrrhizin high producing strain73.602
DRR006522Root Winter glycyrrhizin high producing strain71.324
DRR006523Root Summer glycyrrhizin low producing strain17.967
DRR006524Root Summer glycyrrhizin low producing strain17.685
DRR006525Leaf Summer glycyrrhizin high producing strain36.648
DRR006526Leaf Summer glycyrrhizin high producing strain38.768

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.977
SRR2868004Drought Stress(Tissue:root)16.949
SRR2967015Control (Tissue:root)18.618

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.086
SRR9715740Leave41.795
SRR9715741Leave20.014
SRR9715739Root6.006
SRR9715742Root9.754
SRR9715743Root7.996

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.083
SRR8749028MeJA induced 9h4.344
SRR8749029MeJA induced 9h2.804
SRR8749030Uninduced3.835
SRR8749031Uninduced5.664
SRR8749032Uninduced4.958

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.650
SRR8400027Control-Root10.322

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved