Gene detail information of Glyur000089s00008813.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G21330.10fructose-bisphosphate aldolase 1
NRXP_003522841.10PREDICTED: probable fructose-bisphosphate aldolase 2, chloroplastic-like [Glycine max]
COGYP_007218188.15.00E-97Fructose-bisphosphate aldolase class I [Thioalkalivibrio nitratireducens DSM 14787]
Swissprottr|Q9SJU4|ALFC1_ARATH0Probable fructose-bisphosphate aldolase 1, chloroplastic (Precursor)
trEMBLtr|I1JSJ3|I1JSJ3_SOYBN0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00089229224232410-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000089s00008813.1PF00274.14Glycolytic551802.40E-57
Glyur000089s00008813.1PF00274.14Glycolytic1803786.00E-89


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control119.150
SRR1783600control118.805
SRR1783602moderate drought stress97.774
SRR1811619moderate drought stress97.411

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain103.341
DRR006520Root Summer glycyrrhizin high producing strain102.830
DRR006521Root Winter glycyrrhizin high producing strain56.221
DRR006522Root Winter glycyrrhizin high producing strain55.446
DRR006523Root Summer glycyrrhizin low producing strain91.341
DRR006524Root Summer glycyrrhizin low producing strain93.801
DRR006525Leaf Summer glycyrrhizin high producing strain2596.734
DRR006526Leaf Summer glycyrrhizin high producing strain2585.570

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.378
SRR2868004Drought Stress(Tissue:root)30.045
SRR2967015Control (Tissue:root)18.349

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1684.650
SRR9715740Leave2249.278
SRR9715741Leave1396.163
SRR9715739Root176.878
SRR9715742Root101.393
SRR9715743Root108.449

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.708
SRR8749028MeJA induced 9h10.955
SRR8749029MeJA induced 9h15.029
SRR8749030Uninduced9.888
SRR8749031Uninduced5.119
SRR8749032Uninduced16.722

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root122.563
SRR8400027Control-Root167.263

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved