Gene detail information of Glyur000089s00008822.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36240.11.00E-37GATA transcription factor 7
NRXP_004500773.15.30E-130PREDICTED: GATA transcription factor 5-like [Cicer arietinum]
Swissprottr|O65515|GATA7_ARATH3.00E-49GATA transcription factor 7
trEMBLtr|I1K730|I1K730_SOYBN3.00E-130Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G01110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00089286100288327-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-GATA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0045893  positive regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0008270  zinc ion binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000089s00008822.1PF00320.22GATA2222551.70E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.286
SRR1783600control20.355
SRR1783602moderate drought stress30.438
SRR1811619moderate drought stress30.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain82.142
DRR006520Root Summer glycyrrhizin high producing strain81.213
DRR006521Root Winter glycyrrhizin high producing strain39.256
DRR006522Root Winter glycyrrhizin high producing strain38.378
DRR006523Root Summer glycyrrhizin low producing strain150.166
DRR006524Root Summer glycyrrhizin low producing strain149.958
DRR006525Leaf Summer glycyrrhizin high producing strain42.310
DRR006526Leaf Summer glycyrrhizin high producing strain41.923

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.865
SRR2868004Drought Stress(Tissue:root)58.836
SRR2967015Control (Tissue:root)106.451

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave212.016
SRR9715740Leave306.889
SRR9715741Leave277.510
SRR9715739Root332.441
SRR9715742Root281.250
SRR9715743Root271.802

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h279.315
SRR8749028MeJA induced 9h246.860
SRR8749029MeJA induced 9h252.337
SRR8749030Uninduced233.027
SRR8749031Uninduced108.659
SRR8749032Uninduced234.392

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.448
SRR8400027Control-Root87.120

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved