Gene detail information of Glyur000090s00011408.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G56010.21.00E-19NAC domain containing protein 1
NRXP_003595973.12.07E-74NAC domain protein [Medicago truncatula]
Swissprottr|Q84TE6|NAC22_ARATH4.00E-27NAC domain-containing protein 21/22
trEMBLtr|F6KIF1|F6KIF1_MEDTR8.00E-75NAC1 {ECO:0000313|EMBL:AEE99077.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00090186350191097+


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000090s00011408.1PF02365.10NAM11569.90E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.163
SRR1783600control8.846
SRR1783602moderate drought stress16.640
SRR1811619moderate drought stress16.625

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.471
DRR006520Root Summer glycyrrhizin high producing strain0.460
DRR006521Root Winter glycyrrhizin high producing strain0.640
DRR006522Root Winter glycyrrhizin high producing strain0.414
DRR006523Root Summer glycyrrhizin low producing strain2.023
DRR006524Root Summer glycyrrhizin low producing strain2.102
DRR006525Leaf Summer glycyrrhizin high producing strain2.737
DRR006526Leaf Summer glycyrrhizin high producing strain3.150

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)142.216
SRR2868004Drought Stress(Tissue:root)101.482
SRR2967015Control (Tissue:root)106.828

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.729
SRR9715740Leave18.179
SRR9715741Leave19.870
SRR9715739Root0.215
SRR9715742Root0.323
SRR9715743Root0.922

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.377
SRR8749028MeJA induced 9h61.775
SRR8749029MeJA induced 9h10.420
SRR8749030Uninduced39.788
SRR8749031Uninduced21.707
SRR8749032Uninduced7.185

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.880
SRR8400027Control-Root21.594

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved