Gene detail information of Glyur000090s00011416.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G16670.1 | 7.00E-147 | Protein kinase superfamily protein |
| NR | XP_006598182.1 | 0 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440-like [Glycine max] |
| COG | YP_003961248.1 | 3.00E-29 | hypothetical protein [Eubacterium limosum KIST612] |
| Swissprot | tr|C0LGH3|Y5614_ARATH | 6.00E-110 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 (Precursor) |
| trEMBL | tr|I1MJ49|I1MJ49_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G40440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 259952 | 263867 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.7.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011416.1 | PF07714.12 | Pkinase_Tyr | 51 | 318 | 4.60E-46 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.776 |
| SRR1783600 | control | 5.114 |
| SRR1783602 | moderate drought stress | 8.361 |
| SRR1811619 | moderate drought stress | 8.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.048 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.989 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 40.074 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 39.743 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.067 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.574 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.553 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.807 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.563 |
| SRR2967015 | Control (Tissue:root) | 9.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 17.619 |
| SRR9715740 | Leave | 14.222 |
| SRR9715741 | Leave | 40.657 |
| SRR9715739 | Root | 3.207 |
| SRR9715742 | Root | 7.124 |
| SRR9715743 | Root | 6.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.610 |
| SRR8749028 | MeJA induced 9h | 78.104 |
| SRR8749029 | MeJA induced 9h | 70.668 |
| SRR8749030 | Uninduced | 151.835 |
| SRR8749031 | Uninduced | 163.256 |
| SRR8749032 | Uninduced | 78.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.281 |
| SRR8400027 | Control-Root | 9.869 |