Gene detail information of Glyur000090s00011429.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53700.1 | 5.00E-144 | WAG 1 |
| NR | KEH38373.1 | 0 | Serine/Threonine kinase family protein [Medicago truncatula] |
| COG | YP_827085.1 | 9.00E-21 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| Swissprot | tr|Q9LUL2|WAG2_ARATH | 0 | Serine/threonine-protein kinase WAG2 |
| trEMBL | tr|A0A072VAI5|A0A072VAI5_MEDTR | 0 | Serine/Threonine kinase family protein {ECO:0000313|EMBL:KEH38373.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00090 | 331905 | 333350 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.2.6 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000090s00011429.1 | PF00069.20 | Pkinase | 100 | 405 | 3.10E-53 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.091 |
| SRR1811619 | moderate drought stress | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.806 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.698 |
| SRR2967015 | Control (Tissue:root) | 4.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.214 |
| SRR9715740 | Leave | 0.131 |
| SRR9715741 | Leave | 0.090 |
| SRR9715739 | Root | 0.004 |
| SRR9715742 | Root | 0.141 |
| SRR9715743 | Root | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.926 |
| SRR8749028 | MeJA induced 9h | 0.371 |
| SRR8749029 | MeJA induced 9h | 0.061 |
| SRR8749030 | Uninduced | 0.455 |
| SRR8749031 | Uninduced | 0.106 |
| SRR8749032 | Uninduced | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.407 |
| SRR8400027 | Control-Root | 0.521 |