Gene detail information of Glyur000090s00011431.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G17230.10Leucine-rich receptor-like protein kinase family protein
NRKHN26789.10Leucine-rich repeat receptor-like serine/threonine-protein kinase [Glycine soja]
COGYP_004775215.15.00E-61RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SHI2|Y1723_ARATH0Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 (Precursor)
trEMBLtr|I1KU79|I1KU79_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G18610.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00090338027342452+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000090s00011431.1PF08263.7LRRNT_234712.20E-11
Glyur000090s00011431.1PF00560.28LRR_13653860.52
Glyur000090s00011431.1PF00560.28LRR_15565780.022
Glyur000090s00011431.1PF00560.28LRR_16336510.39
Glyur000090s00011431.1PF07714.12Pkinase_Tyr8159017.80E-15
Glyur000090s00011431.1PF07714.12Pkinase_Tyr90610000.00014


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.156
SRR1783600control1.179
SRR1783602moderate drought stress2.151
SRR1811619moderate drought stress2.236

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.715
DRR006520Root Summer glycyrrhizin high producing strain2.725
DRR006521Root Winter glycyrrhizin high producing strain5.932
DRR006522Root Winter glycyrrhizin high producing strain5.947
DRR006523Root Summer glycyrrhizin low producing strain3.008
DRR006524Root Summer glycyrrhizin low producing strain3.093
DRR006525Leaf Summer glycyrrhizin high producing strain0.317
DRR006526Leaf Summer glycyrrhizin high producing strain0.307

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.995
SRR2868004Drought Stress(Tissue:root)3.767
SRR2967015Control (Tissue:root)2.639

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.177
SRR9715740Leave0.930
SRR9715741Leave1.345
SRR9715739Root1.182
SRR9715742Root7.125
SRR9715743Root6.425

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.437
SRR8749028MeJA induced 9h13.907
SRR8749029MeJA induced 9h3.726
SRR8749030Uninduced3.284
SRR8749031Uninduced0.897
SRR8749032Uninduced1.656

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.019
SRR8400027Control-Root6.284

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved