Gene detail information of Glyur000091s00010506.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G40610.14.00E-139NAD-dependent glycerol-3-phosphate dehydrogenase family protein
NRXP_004489553.10PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)]-like [Cicer arietinum]
COGYP_702359.17.00E-28NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Rhodococcus jostii RHA1]
Swissprottr|P52425|GPDA_CUPLA0Glycerol-3-phosphate dehydrogenase [NAD(+)]
trEMBLtr|I1N6W6|I1N6W6_SOYBN0Glycerol-3-phosphate dehydrogenase [NAD(+)] {ECO:0000256|RuleBase:RU361243}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000911108315300-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00006GPD1 EC:1.1.1.8 Glycerophospholipid metabolism map00564
MAPK signaling pathway - yeastmap04011


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006072  glycerol-3-phosphate metabolic process

GO:0046168  glycerol-3-phosphate catabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0009331  glycerol-3-phosphate dehydrogenase complex


molecular_function

GO:0004367  glycerol-3-phosphate dehydrogenase [NAD+] activity

GO:0016491  oxidoreductase activity

GO:0016616  oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

GO:0042803  protein homodimerization activity

GO:0051287  NAD binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000091s00010506.2PF01210.18NAD_Gly3P_dh_N531423.30E-23
Glyur000091s00010506.2PF07479.9NAD_Gly3P_dh_C1633122.90E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.942
SRR1783600control2.976
SRR1783602moderate drought stress1.246
SRR1811619moderate drought stress1.241

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.553
DRR006520Root Summer glycyrrhizin high producing strain2.519
DRR006521Root Winter glycyrrhizin high producing strain0.084
DRR006522Root Winter glycyrrhizin high producing strain0.073
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain2.662
DRR006526Leaf Summer glycyrrhizin high producing strain2.739

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.690
SRR2868004Drought Stress(Tissue:root)7.781
SRR2967015Control (Tissue:root)9.111

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.077
SRR9715740Leave0.079
SRR9715741Leave0.144
SRR9715739Root1.208
SRR9715742Root1.661
SRR9715743Root0.972

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.506
SRR8400027Control-Root14.495

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved