Gene detail information of Glyur000091s00010521.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38180.1 | 4.00E-56 | FAR1-related sequence 5 |
| NR | XP_006579691.1 | 0 | PREDICTED: protein FAR1-RELATED SEQUENCE 7-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9SZL8|FRS5_ARATH | 2.00E-64 | Protein FAR1-RELATED SEQUENCE 5 |
| trEMBL | tr|V7C060|V7C060_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW23567.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00091 | 105884 | 108212 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000091s00010521.1 | PF03101.10 | FAR1 | 123 | 209 | 2.30E-20 |
| Glyur000091s00010521.1 | PF03101.10 | FAR1 | 245 | 333 | 1.70E-26 |
| Glyur000091s00010521.1 | PF10551.4 | MULE | 426 | 499 | 8.20E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.209 |
| SRR1783600 | control | 2.408 |
| SRR1783602 | moderate drought stress | 3.706 |
| SRR1811619 | moderate drought stress | 3.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.662 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.503 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.965 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.107 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.488 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.274 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.849 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.853 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.339 |
| SRR2967015 | Control (Tissue:root) | 7.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.663 |
| SRR9715740 | Leave | 2.009 |
| SRR9715741 | Leave | 4.010 |
| SRR9715739 | Root | 0.042 |
| SRR9715742 | Root | 1.115 |
| SRR9715743 | Root | 1.300 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.365 |
| SRR8749028 | MeJA induced 9h | 5.028 |
| SRR8749029 | MeJA induced 9h | 1.917 |
| SRR8749030 | Uninduced | 4.526 |
| SRR8749031 | Uninduced | 5.204 |
| SRR8749032 | Uninduced | 3.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.213 |
| SRR8400027 | Control-Root | 3.918 |