Gene detail information of Glyur000091s00010524.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01720.1 | 0 | |
| NR | XP_003525612.1 | 0 | PREDICTED: uncharacterized protein LOC100776740 [Glycine max] |
| trEMBL | tr|I1K132|I1K132_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G06390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00091 | 119349 | 126887 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K20781 | SGT1 | EC:2.4.1.- | Other types of O-glycan biosynthesis | map00514 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 29.174 |
| SRR1783600 | control | 29.091 |
| SRR1783602 | moderate drought stress | 22.118 |
| SRR1811619 | moderate drought stress | 22.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.280 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.925 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.106 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.311 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.387 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 48.547 |
| SRR2868004 | Drought Stress(Tissue:root) | 40.214 |
| SRR2967015 | Control (Tissue:root) | 36.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.983 |
| SRR9715740 | Leave | 12.280 |
| SRR9715741 | Leave | 13.103 |
| SRR9715739 | Root | 6.518 |
| SRR9715742 | Root | 27.156 |
| SRR9715743 | Root | 23.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.625 |
| SRR8749028 | MeJA induced 9h | 28.108 |
| SRR8749029 | MeJA induced 9h | 10.965 |
| SRR8749030 | Uninduced | 10.770 |
| SRR8749031 | Uninduced | 3.752 |
| SRR8749032 | Uninduced | 3.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 39.523 |
| SRR8400027 | Control-Root | 37.580 |