Gene detail information of Glyur000091s00010527.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14605.1 | 2.00E-140 | Mitochondrial transcription termination factor family protein |
| NR | XP_003524622.1 | 0 | PREDICTED: uncharacterized protein LOC100781900 isoform 2 [Glycine max] |
| trEMBL | tr|I1K1Z7|I1K1Z7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G15170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00091 | 133192 | 136424 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000091s00010527.1 | PF02536.9 | mTERF | 217 | 392 | 1.70E-28 |
| Glyur000091s00010527.1 | PF02536.9 | mTERF | 386 | 485 | 4.30E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.093 |
| SRR1783600 | control | 1.102 |
| SRR1783602 | moderate drought stress | 1.924 |
| SRR1811619 | moderate drought stress | 1.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.437 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.877 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.553 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.546 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.315 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.129 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.658 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.060 |
| SRR2967015 | Control (Tissue:root) | 4.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.478 |
| SRR9715740 | Leave | 13.043 |
| SRR9715741 | Leave | 6.926 |
| SRR9715739 | Root | 0.391 |
| SRR9715742 | Root | 0.689 |
| SRR9715743 | Root | 0.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.791 |
| SRR8749028 | MeJA induced 9h | 2.440 |
| SRR8749029 | MeJA induced 9h | 0.451 |
| SRR8749030 | Uninduced | 1.280 |
| SRR8749031 | Uninduced | 0.676 |
| SRR8749032 | Uninduced | 0.434 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.267 |
| SRR8400027 | Control-Root | 2.513 |