Gene detail

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Gene detail information of Glyur000091s00010556.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G14210.1	3.00E-138	Leucine-rich repeat protein kinase family protein
NR	KHN45327.1	0	Putative inactive leucine-rich repeat receptor-like protein kinase [Glycine soja]
COG	YP_004429344.1	7.00E-14	leucine-rich repeat-containing protein [Krokinobacter sp. 4H-3-7-5]
Swissprot	tr\|Q8LFN2\|Y3037_ARATH	3.00E-113	Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (Precursor)
trEMBL	tr\|I1K1Z6\|I1K1Z6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G15150.1}

Sequence

Transcript Sequence

>Glyur000091s00010556.1
ATGGTGAAGCTTCATTCACTAACACTTGATGACAACTATTTGAACACCACCATGCCTAATTGGTTTGATTCTTTGTCTAATCTAAGTATCTTGAGTTTGAAGAGTAACCANTTAAAGGGCTCATTCCCTTCCTCACTATGCAAANTTAAGACACTTGAGGTTATTTCCTTGTCCCACAATGAACTCTCTGGTGAATTGCCTAGTGGTCTTAATGCTCTCACTGGCCTACATGTTTTGGATTTAAGAGAAAACCANTTAGAATCTGAACTACCACTTTTGCCCAAATCAGTGGTCACTGTTTTGCTGAGCAATAACTCATTCAAAGGAGAGATACCAAGGAATTATTTGAATCTAGCAAGCAATTTGCTAAGTGGATCCCTTTCTGAGAAACTGAGGTGTGGAAGCAAACTTGGGTATGTGGATATTTCTAGTAACAAGTTGAGTGGTGAACTTCCTTCTTGCTTGGCCAATACTTCTAATGGTAGAGTTGTGAGATATGGTAGGAACTGTTTATATGTTGATTCTCAGCCTCAGCAGCAGAGAGGGTCTCATTGTAAAGAATCAAGTACGGGATGGTGGAAGAGATTGAAGGCATGGAAATTAGCTGTAGCAGTGGCCATCATTGTTGGACTTGTTCTTGTGATTTTGGTGTCTGGAGTTTTCTTGTGTAGAAAATGTCATTTGAGGAAGACAACTGGGCAGCAGGGTTCGCTGCTAAAGGTTGTCCAAGATAACTCCACAACTGGGGTTTCATCAGAACTCCTTACAAATGCCAGATTCATTTCTCAAACAGTGAAGCTAGGGACACAAGCAACTCCAACCTGTAGACAATTTTCAATAGAAGACTTGNAGGAAGCCACCAAAAACTTTGATTTNTCAACTTATCTTGGTGAAGGCTCCACAGGGAAGCTTTATAAAGGTAAACTAGAGAATGGATCTCACGTGGTGATACGGTCTTTGGTTCTGTCAAAGAAATGCTCAGGTCAAAATCTTAAAGCTAAGTTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGATGGTGGTGCACAAGATGATCCCAACACCCACAAACTTCATCTTATATATGAGTATGTGCCAAATGGGAATTATCGTACCCATCTATCAGAATTTTCTGCAGAGAAGGCACTTAAGTGGTCTGATAGACTGGCAATTTTGATTGGAGTTGCAAAGGCAGTGCATTTCTTACACACTGGTGTTATACCAGGATGTTTTAGCAACCAACTAAAGACAAAGAATGTCTTACTTGATGAGCATAACATTCCAAAACTAAGTGACTATGGCATGTCCATCGTCAAAGAAGAAATTGAAAAGTTTGAGAGGACAAAAATGGAGGATGATGTTTATAATTTCGGATTCATATTGTTTGAATCACTTGTTGGACCCATTGCATGTGACAAAGGGGAAGCATTTTTTCTAAATGAAAAGATTGTGGATCCAGCAGTGTTGACCACTTGCTCTCAAGAGTCACTATCAATTGCAATATCAATAACAACCAAATGCATATCTCCAGACCCNTCATCTCGTCCTTCTTTTGAGGATGTTCTGTGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATACAGATCAGAAATCAGATTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00091	324360	328942	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.5

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000091s00010556.1	PF00560.28	LRR_1	52	71	0.63
Glyur000091s00010556.1	PF07714.12	Pkinase_Tyr	294	532	9.80E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.449
SRR1783600	control	1.590
SRR1783602	moderate drought stress	2.014
SRR1811619	moderate drought stress	1.698

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.035
DRR006520	Root Summer glycyrrhizin high producing strain	1.582
DRR006521	Root Winter glycyrrhizin high producing strain	0.774
DRR006522	Root Winter glycyrrhizin high producing strain	0.886
DRR006523	Root Summer glycyrrhizin low producing strain	0.650
DRR006524	Root Summer glycyrrhizin low producing strain	0.772
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.314
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.171

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	4.172
SRR2868004	Drought Stress(Tissue:root)	4.473
SRR2967015	Control (Tissue:root)	5.126

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.785
SRR9715740	Leave	2.174
SRR9715741	Leave	5.379
SRR9715739	Root	0.030
SRR9715742	Root	1.043
SRR9715743	Root	1.276

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.211
SRR8749028	MeJA induced 9h	0.272
SRR8749029	MeJA induced 9h	0.140
SRR8749030	Uninduced	0.017
SRR8749031	Uninduced	0.131
SRR8749032	Uninduced	0.053

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	4.353
SRR8400027	Control-Root	4.023