Gene detail information of Glyur000092s00007507.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G55880.14.00E-175Pyridoxal-5'-phosphate-dependent enzyme family protein
NRXP_004491509.10PREDICTED: cysteine synthase 2-like [Cicer arietinum]
COGYP_007102480.13.00E-107cysteine synthase [Pseudanabaena sp. PCC 7367]
Swissprottr|P38076|CYSK_WHEAT6.00E-31Cysteine synthase
trEMBLtr|G7K4P9|G7K4P9_MEDTR0Pyridoxal-5'-phosphate-dependent enzyme family protein {ECO:0000313|EMBL:AET00765.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00092134842138114-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01738cysK EC:2.5.1.47 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000092s00007507.1PF00291.20PALP473796.70E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.204
SRR1783600control5.301
SRR1783602moderate drought stress5.397
SRR1811619moderate drought stress5.309

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.601
DRR006520Root Summer glycyrrhizin high producing strain9.516
DRR006521Root Winter glycyrrhizin high producing strain17.491
DRR006522Root Winter glycyrrhizin high producing strain17.136
DRR006523Root Summer glycyrrhizin low producing strain15.450
DRR006524Root Summer glycyrrhizin low producing strain16.382
DRR006525Leaf Summer glycyrrhizin high producing strain5.210
DRR006526Leaf Summer glycyrrhizin high producing strain5.278

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.093
SRR2868004Drought Stress(Tissue:root)21.143
SRR2967015Control (Tissue:root)21.748

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.990
SRR9715740Leave11.923
SRR9715741Leave13.545
SRR9715739Root3.780
SRR9715742Root8.796
SRR9715743Root7.258

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.456
SRR8749028MeJA induced 9h8.151
SRR8749029MeJA induced 9h9.621
SRR8749030Uninduced10.808
SRR8749031Uninduced10.455
SRR8749032Uninduced9.209

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.157
SRR8400027Control-Root16.896