Gene detail information of Glyur000092s00007516.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G13110.13.00E-88serine acetyltransferase 2;2
NRXP_004491499.11.79E-150PREDICTED: serine acetyltransferase 3, mitochondrial-like [Cicer arietinum]
COGYP_001980889.13.00E-73serine acetyltransferase [Cellvibrio japonicus Ueda107]
Swissprottr|Q39218|SAT3_ARATH7.00E-119Serine acetyltransferase 3, mitochondrial (Precursor)
trEMBLtr|V7B9Y2|V7B9Y2_PHAVU2.00E-138Uncharacterized protein {ECO:0000313|EMBL:ESW14400.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00092173769174862+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00640cysE EC:2.3.1.30 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270
Biofilm formation - Vibrio choleraemap05111


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0009001  serine O-acetyltransferase activity

GO:0016740  transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000092s00007516.1PF06426.9SATase_N891466.40E-16
Glyur000092s00007516.1PF00132.19Hexapep2272612.60E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.385
SRR1783600control38.444
SRR1783602moderate drought stress57.457
SRR1811619moderate drought stress58.536

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.026
DRR006520Root Summer glycyrrhizin high producing strain32.605
DRR006521Root Winter glycyrrhizin high producing strain3.969
DRR006522Root Winter glycyrrhizin high producing strain4.610
DRR006523Root Summer glycyrrhizin low producing strain55.286
DRR006524Root Summer glycyrrhizin low producing strain56.226
DRR006525Leaf Summer glycyrrhizin high producing strain2.733
DRR006526Leaf Summer glycyrrhizin high producing strain2.166

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.865
SRR2868004Drought Stress(Tissue:root)36.994
SRR2967015Control (Tissue:root)28.779

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.281
SRR9715740Leave8.245
SRR9715741Leave8.594
SRR9715739Root39.922
SRR9715742Root35.808
SRR9715743Root34.171

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.095
SRR8749028MeJA induced 9h24.850
SRR8749029MeJA induced 9h16.775
SRR8749030Uninduced56.068
SRR8749031Uninduced34.536
SRR8749032Uninduced22.622

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.495
SRR8400027Control-Root30.564

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved