Gene detail

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Gene detail information of Glyur000092s00007517.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G26310.1	3.00E-72	cytochrome P450, family 71, subfamily B, polypeptide 35
NR	AHB62239.1	0	cytochrome P450 [Lotus japonicus]
COG	YP_004316494.1	1.00E-30	monooxygenase [Sphingobacterium sp. 21]
Swissprot	tr\|O22307\|C71DB_LOTJA	1.00E-157	Cytochrome P450 71D11 (Fragment)
trEMBL	tr\|A0A023IZ17\|A0A023IZ17_LOTJA	0	Cytochrome P450 {ECO:0000313\|EMBL:AHB62239.1}

Sequence

Transcript Sequence

>Glyur000092s00007517.1
ATGAGAGAGTTGTCCCAAACATATGGCCCTATCATGCACCTACAACTTGGAGAGACTTCAGCCATAGTGATTTCTTCTCCAGAAATTGCCAAAGAGGTGTTGAAAACACATGGAGTCACATTTGCTCAACGACCTCGCTTCCTTGGTGCAGAAATTGCAGCTTATGGTAACACCAACATAGCCTTTTCACCCTATGGAGACTATTGGAGGCAGCTAAGGAAAATATGCACATTGGACCTTTTGAGATCTGTTCTCAACCTCACGGATGAAATTTCATCTATGACATATGGCATCATTGCAAGGGCAGCTTTNGGTGATAAATGCAAGGACCAAGATGAATACATAAGCTTCATCAAGAGAAGTATGAGATTGGCAGAGAGTTTCAGTGTCACTAATTTGTATCCTTCCCAACGTTGGCTGCATGTGATTAGTGGAATGGTGCATAAGTTTAAGGAACTACATAGGACTGGTGATGTGACTCTCCAAAATATCATTAATAAAGCAACATCAAAGACTAGTGGTGGAGATGAAAATAGTCTTCTGTCCGTTCTTCTGAATCTGGAAGATCATGGTGCCCCTGACCCTGGATTTCATTTGACAATCAACAACATTAAAGCCGTCATTCAGGATATGTTTATTGGTGGAGGTGAGACATCATCTATAACTTTGGAATGGGCTTTCTCAGAAATGCTGAAAAACCCAAGAGCACTGAAAAGGGCCCAAGCAGAGGTTAGGCAAGTCTTTNGTATCAGGGGATATGTTGATGAAATGGGCCTTCAGGAACTGAAATTTCTAAAAGCAGTCATCAAAGAAACCTTGAGATTACACCCTCCTGGTCCTTTGCTACTTCCAAGGGAGTGTGGTGAAACTTGTGAGGTTAATGGGTACACAATACCAACTGGAACCCAAGTGTATGTGAATGCATGGGCAATAGGAAGAGACTCAAAGTATTGGAGTGAAGGAGAGAGGTTTTGTCCTGAGAGGTTCCTGGATTGTCCTATNGACTACAAGGGTTCCAATTTTGAGTTCATACCATTTGGTGCAGGGAAGAGAATATGTCCTGGCATTTTGTTTGCTGCAGCTAACTTGGAGCTTCCTCTTGCACAGATGCTGTACTATTTTGATTGGGAACTTCCCTCTGGAACCAGTCATGAAAACTTTGACATGACTGAAGCCTTTGGCACCACAGTGAGAAGGAAAAATGATCTATTTGTAATCCCTATTTCTTACAATCCTGTACCTGTTGAGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00092	177121	179881	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B35

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000092s00007517.1	PF00067.17	p450	1	81	2.90E-12
Glyur000092s00007517.1	PF00067.17	p450	84	395	5.80E-71

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.035
DRR006520	Root Summer glycyrrhizin high producing strain	1.492
DRR006521	Root Winter glycyrrhizin high producing strain	0.174
DRR006522	Root Winter glycyrrhizin high producing strain	0.172
DRR006523	Root Summer glycyrrhizin low producing strain	2.061
DRR006524	Root Summer glycyrrhizin low producing strain	2.257
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.034
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.685
SRR9715740	Leave	0.025
SRR9715741	Leave	0.439
SRR9715739	Root	0.098
SRR9715742	Root	1.444
SRR9715743	Root	0.933

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.187
SRR8749029	MeJA induced 9h	0.071
SRR8749030	Uninduced	0.177
SRR8749031	Uninduced	0.203
SRR8749032	Uninduced	0.261

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.040
SRR8400027	Control-Root	0.272