Gene detail information of Glyur000092s00007537.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26640.23.00E-34WRKY family transcription factor family protein
NRXP_003519618.11.01E-100PREDICTED: probable WRKY transcription factor 20-like isoform X1 [Glycine max]
Swissprottr|Q93WV0|WRK20_ARATH3.00E-38Probable WRKY transcription factor 20
trEMBLtr|I1JJG7|I1JJG7_SOYBN4.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G46690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00092275494280062-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000092s00007537.2PF03106.10WRKY2112495.60E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.558
SRR1783600control11.908
SRR1783602moderate drought stress10.410
SRR1811619moderate drought stress10.006

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.184
DRR006520Root Summer glycyrrhizin high producing strain18.218
DRR006521Root Winter glycyrrhizin high producing strain4.313
DRR006522Root Winter glycyrrhizin high producing strain4.304
DRR006523Root Summer glycyrrhizin low producing strain16.766
DRR006524Root Summer glycyrrhizin low producing strain16.421
DRR006525Leaf Summer glycyrrhizin high producing strain12.264
DRR006526Leaf Summer glycyrrhizin high producing strain12.138

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.729
SRR2868004Drought Stress(Tissue:root)15.593
SRR2967015Control (Tissue:root)16.679

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.645
SRR9715740Leave8.818
SRR9715741Leave8.903
SRR9715739Root2.061
SRR9715742Root10.568
SRR9715743Root9.471

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.847
SRR8749028MeJA induced 9h7.986
SRR8749029MeJA induced 9h7.343
SRR8749030Uninduced2.817
SRR8749031Uninduced1.895
SRR8749032Uninduced2.326

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.220
SRR8400027Control-Root22.550

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved