Gene detail information of Glyur000092s00007541.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53320.1 | 4.00E-57 | Leucine-rich repeat protein kinase family protein |
| NR | XP_006575703.1 | 0 | PREDICTED: probable inactive receptor kinase At2g26730-like [Glycine max] |
| COG | YP_284821.1 | 2.00E-10 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| Swissprot | tr|Q9FK10|Y5332_ARATH | 5.00E-65 | Probable inactive receptor kinase At5g53320 (Precursor) |
| trEMBL | tr|K7KBK1|K7KBK1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G46661.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00092 | 298176 | 300565 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.12.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000092s00007541.1 | PF12799.2 | LRR_4 | 110 | 146 | 1.60E-06 |
| Glyur000092s00007541.1 | PF00069.20 | Pkinase | 323 | 548 | 1.70E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.020 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.127 |
| SRR1811619 | moderate drought stress | 0.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.007 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.163 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.514 |
| SRR2967015 | Control (Tissue:root) | 0.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.016 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.037 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.030 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.012 |
| SRR8400027 | Control-Root | 0.010 |