Gene detail information of Glyur000093s00009370.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28250.22.00E-160Protein kinase superfamily protein
NRXP_003539772.10PREDICTED: receptor-like serine/threonine-protein kinase NCRK-like isoform X1 [Glycine max]
COGYP_001958461.13.00E-21hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q8VYY5|NCRK_ARATH0Receptor-like serine/threonine-protein kinase NCRK (Precursor)
trEMBLtr|K7LTL2|K7LTL2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G08210.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000935935565741-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000093s00009370.1PF00069.20Pkinase2465205.80E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.032
SRR1783600control13.201
SRR1783602moderate drought stress15.170
SRR1811619moderate drought stress15.186

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.051
DRR006520Root Summer glycyrrhizin high producing strain21.651
DRR006521Root Winter glycyrrhizin high producing strain6.654
DRR006522Root Winter glycyrrhizin high producing strain6.433
DRR006523Root Summer glycyrrhizin low producing strain21.769
DRR006524Root Summer glycyrrhizin low producing strain22.039
DRR006525Leaf Summer glycyrrhizin high producing strain5.414
DRR006526Leaf Summer glycyrrhizin high producing strain5.528

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.260
SRR2868004Drought Stress(Tissue:root)26.400
SRR2967015Control (Tissue:root)28.058

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.407
SRR9715740Leave14.891
SRR9715741Leave18.179
SRR9715739Root2.346
SRR9715742Root8.861
SRR9715743Root6.281

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.305
SRR8749028MeJA induced 9h12.882
SRR8749029MeJA induced 9h8.319
SRR8749030Uninduced6.882
SRR8749031Uninduced8.718
SRR8749032Uninduced8.882

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root59.743
SRR8400027Control-Root67.116

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved