Gene detail information of Glyur000093s00009396.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G57620.1 | 8.00E-64 | myb domain protein 36 |
| NR | XP_004506057.1 | 3.47E-131 | PREDICTED: transcription factor RAX2-like [Cicer arietinum] |
| Swissprot | tr|Q70YV7|RAX1_ARATH | 6.00E-73 | Transcription factor RAX1 |
| trEMBL | tr|I1LR75|I1LR75_SOYBN | 5.00E-123 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G08480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00093 | 253856 | 255483 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000093s00009396.1 | PF00249.26 | Myb_DNA-binding | 14 | 62 | 2.00E-14 |
| Glyur000093s00009396.1 | PF00249.26 | Myb_DNA-binding | 69 | 111 | 3.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.930 |
| SRR1783600 | control | 5.551 |
| SRR1783602 | moderate drought stress | 8.449 |
| SRR1811619 | moderate drought stress | 8.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.104 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.103 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.089 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 30.336 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.821 |
| SRR2967015 | Control (Tissue:root) | 31.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.094 |
| SRR9715740 | Leave | 0.253 |
| SRR9715741 | Leave | 0.566 |
| SRR9715739 | Root | 2.823 |
| SRR9715742 | Root | 8.116 |
| SRR9715743 | Root | 5.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.295 |
| SRR8749028 | MeJA induced 9h | 50.403 |
| SRR8749029 | MeJA induced 9h | 20.547 |
| SRR8749030 | Uninduced | 155.173 |
| SRR8749031 | Uninduced | 7.366 |
| SRR8749032 | Uninduced | 17.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 67.392 |
| SRR8400027 | Control-Root | 53.336 |