Gene detail information of Glyur000093s00009403.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36870.11.00E-110xyloglucan endotransglucosylase/hydrolase 32
NRKHN21066.10Putative xyloglucan endotransglucosylase/hydrolase protein 32 [Glycine soja]
COGYP_003830841.13.00E-14endo-1,3(4)-beta-glucanase [Butyrivibrio proteoclasticus B316]
Swissprottr|Q9SJL9|XTH32_ARATH6.00E-157Probable xyloglucan endotransglucosylase/hydrolase protein 32 (Precursor)
trEMBLtr|C6TJL7|C6TJL7_SOYBN0Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00093306923309466+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH16


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006073  cellular glucan metabolic process


cellular_component

GO:0005618  cell wall

GO:0048046  apoplast


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0016762  xyloglucan:xyloglucosyl transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000093s00009403.1PF00722.16Glyco_hydro_16462274.20E-55
Glyur000093s00009403.1PF06955.7XET_C2592982.50E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.604
SRR1783600control6.600
SRR1783602moderate drought stress6.421
SRR1811619moderate drought stress6.450

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.442
DRR006520Root Summer glycyrrhizin high producing strain14.872
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain35.563
DRR006524Root Summer glycyrrhizin low producing strain35.248
DRR006525Leaf Summer glycyrrhizin high producing strain0.412
DRR006526Leaf Summer glycyrrhizin high producing strain0.432

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)61.735
SRR2868004Drought Stress(Tissue:root)52.481
SRR2967015Control (Tissue:root)55.594

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.197
SRR9715740Leave0.000
SRR9715741Leave0.193
SRR9715739Root2.806
SRR9715742Root2.802
SRR9715743Root2.792

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.880
SRR8749028MeJA induced 9h1.064
SRR8749029MeJA induced 9h0.495
SRR8749030Uninduced0.024
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.694
SRR8400027Control-Root19.930

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved