Gene detail information of Glyur000094s00007865.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G14880.42.00E-135O-acetylserine (thiol) lyase (OAS-TL) isoform A1
NRNP_001235628.10cysteine synthase [Glycine max]
COGYP_591171.11.00E-127cysteine synthase [Candidatus Koribacter versatilis Ellin345]
Swissprottr|Q43317|CYSK_CITLA0Cysteine synthase
trEMBLtr|Q8W1A0|Q8W1A0_SOYBN0Cysteine synthase {ECO:0000256|RuleBase:RU003985}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00094172421177099+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01738cysK EC:2.5.1.47 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270


Gene Ontology

biological_process

GO:0006535  cysteine biosynthetic process from serine


molecular_function

GO:0004124  cysteine synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000094s00007865.1PF00291.20PALP133151.50E-57


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.349
SRR1783600control46.830
SRR1783602moderate drought stress52.002
SRR1811619moderate drought stress52.020

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain69.595
DRR006520Root Summer glycyrrhizin high producing strain68.930
DRR006521Root Winter glycyrrhizin high producing strain51.833
DRR006522Root Winter glycyrrhizin high producing strain51.333
DRR006523Root Summer glycyrrhizin low producing strain65.371
DRR006524Root Summer glycyrrhizin low producing strain65.412
DRR006525Leaf Summer glycyrrhizin high producing strain51.475
DRR006526Leaf Summer glycyrrhizin high producing strain50.503

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)91.184
SRR2868004Drought Stress(Tissue:root)71.474
SRR2967015Control (Tissue:root)66.023

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave80.166
SRR9715740Leave119.970
SRR9715741Leave102.754
SRR9715739Root52.384
SRR9715742Root74.483
SRR9715743Root70.626

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h79.639
SRR8749028MeJA induced 9h66.717
SRR8749029MeJA induced 9h72.943
SRR8749030Uninduced45.276
SRR8749031Uninduced21.803
SRR8749032Uninduced40.668

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root95.038
SRR8400027Control-Root85.382

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved