Gene detail information of Glyur000094s00007880.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14770.1 | 1.00E-117 | TESMIN/TSO1-like CXC 2 |
| NR | KHN34110.1 | 0 | Protein lin-54 like [Glycine soja] |
| Swissprot | tr|F4JIF5|TCX2_ARATH | 4.00E-163 | Protein tesmin/TSO1-like CXC 2 |
| trEMBL | tr|I1JAR5|I1JAR5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00094 | 241682 | 246886 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | CPP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000094s00007880.1 | PF03638.10 | TCR | 483 | 520 | 9.30E-14 |
| Glyur000094s00007880.1 | PF03638.10 | TCR | 567 | 605 | 2.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.733 |
| SRR1783600 | control | 31.350 |
| SRR1783602 | moderate drought stress | 16.737 |
| SRR1811619 | moderate drought stress | 16.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.719 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.561 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.318 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.390 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.521 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.926 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 43.103 |
| SRR2868004 | Drought Stress(Tissue:root) | 25.923 |
| SRR2967015 | Control (Tissue:root) | 44.897 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.578 |
| SRR9715740 | Leave | 1.185 |
| SRR9715741 | Leave | 3.420 |
| SRR9715739 | Root | 6.119 |
| SRR9715742 | Root | 11.016 |
| SRR9715743 | Root | 10.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.250 |
| SRR8749028 | MeJA induced 9h | 31.703 |
| SRR8749029 | MeJA induced 9h | 37.899 |
| SRR8749030 | Uninduced | 18.721 |
| SRR8749031 | Uninduced | 25.634 |
| SRR8749032 | Uninduced | 11.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 51.453 |
| SRR8400027 | Control-Root | 57.028 |