Gene detail information of Glyur000094s00007883.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G22750.14.00E-175Protein kinase superfamily protein
NRXP_003517568.10PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Glycine max]
COGYP_001958461.15.00E-30hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH5.00E-66Serine/threonine-protein kinase HT1
trEMBLtr|I1JAR3|I1JAR3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44650.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00094265605269769+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000094s00007883.3PF07714.12Pkinase_Tyr1093842.70E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.194
SRR1783600control9.093
SRR1783602moderate drought stress12.609
SRR1811619moderate drought stress12.392

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.443
DRR006520Root Summer glycyrrhizin high producing strain27.712
DRR006521Root Winter glycyrrhizin high producing strain23.701
DRR006522Root Winter glycyrrhizin high producing strain23.319
DRR006523Root Summer glycyrrhizin low producing strain19.412
DRR006524Root Summer glycyrrhizin low producing strain24.281
DRR006525Leaf Summer glycyrrhizin high producing strain13.817
DRR006526Leaf Summer glycyrrhizin high producing strain12.335

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.525
SRR2868004Drought Stress(Tissue:root)14.787
SRR2967015Control (Tissue:root)17.665

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.567
SRR9715740Leave9.991
SRR9715741Leave11.598
SRR9715739Root15.693
SRR9715742Root21.818
SRR9715743Root21.361

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.908
SRR8749028MeJA induced 9h12.501
SRR8749029MeJA induced 9h20.111
SRR8749030Uninduced25.768
SRR8749031Uninduced50.669
SRR8749032Uninduced50.341

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.516
SRR8400027Control-Root34.554

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved