Gene detail information of Glyur000094s00007890.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76690.12.00E-16012-oxophytodienoate reductase 2
NRXP_003517567.20PREDICTED: 12-oxophytodienoate reductase 2 [Glycine max]
COGYP_722736.15.00E-108NADH:flavin oxidoreductase [Trichodesmium erythraeum IMS101]
Swissprottr|Q8GYB8|OPR2_ARATH012-oxophytodienoate reductase 2
trEMBLtr|I1JAQ7|I1JAQ7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G44600.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00094290105304235+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05894OPR EC:1.3.1.42 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000094s00007890.2PF00724.15Oxidored_FMN93415.00E-88
Glyur000094s00007890.2PF00724.15Oxidored_FMN3535137.80E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.237
SRR1783600control2.201
SRR1783602moderate drought stress1.428
SRR1811619moderate drought stress1.374

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.958
DRR006520Root Summer glycyrrhizin high producing strain2.144
DRR006521Root Winter glycyrrhizin high producing strain1.804
DRR006522Root Winter glycyrrhizin high producing strain1.750
DRR006523Root Summer glycyrrhizin low producing strain10.122
DRR006524Root Summer glycyrrhizin low producing strain10.245
DRR006525Leaf Summer glycyrrhizin high producing strain7.451
DRR006526Leaf Summer glycyrrhizin high producing strain7.224

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)62.386
SRR2868004Drought Stress(Tissue:root)141.613
SRR2967015Control (Tissue:root)56.771

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.928
SRR9715740Leave36.694
SRR9715741Leave129.371
SRR9715739Root2.378
SRR9715742Root9.169
SRR9715743Root7.481

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h27.795
SRR8749028MeJA induced 9h34.757
SRR8749029MeJA induced 9h40.906
SRR8749030Uninduced117.770
SRR8749031Uninduced190.378
SRR8749032Uninduced63.806

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.586
SRR8400027Control-Root40.036

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved