Gene detail information of Glyur000094s00007892.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76690.12.00E-2012-oxophytodienoate reductase 2
NRXP_003517567.21.65E-29PREDICTED: 12-oxophytodienoate reductase 2 [Glycine max]
COGYP_001519129.13.00E-15oxidoreductase, FAD/FMN-binding family protein [Acaryochloris marina MBIC11017]
Swissprottr|Q9XG54|OPR1_SOLLC1.00E-2712-oxophytodienoate reductase 1
trEMBLtr|F6I440|F6I440_VITVI5.00E-30Putative uncharacterized protein {ECO:0000313|EMBL:CCB61620.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00094304343304600+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05894OPR EC:1.3.1.42 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000094s00007892.1PF00724.15Oxidored_FMN16614.90E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.705
SRR1783600control0.711
SRR1783602moderate drought stress2.375
SRR1811619moderate drought stress2.064

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.808
DRR006520Root Summer glycyrrhizin high producing strain4.534
DRR006521Root Winter glycyrrhizin high producing strain3.965
DRR006522Root Winter glycyrrhizin high producing strain3.878
DRR006523Root Summer glycyrrhizin low producing strain5.822
DRR006524Root Summer glycyrrhizin low producing strain2.759
DRR006525Leaf Summer glycyrrhizin high producing strain0.717
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.096
SRR2868004Drought Stress(Tissue:root)0.216
SRR2967015Control (Tissue:root)0.017

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.172
SRR9715740Leave0.016
SRR9715741Leave0.029
SRR9715739Root0.026
SRR9715742Root0.000
SRR9715743Root0.145

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.623
SRR8749028MeJA induced 9h0.085
SRR8749029MeJA induced 9h0.083
SRR8749030Uninduced0.311
SRR8749031Uninduced0.067
SRR8749032Uninduced0.337

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.037
SRR8400027Control-Root0.147

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved