Gene detail information of Glyur000095s00007012.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G73080.10PEP1 receptor 1
NRXP_003555482.10PREDICTED: receptor-like protein kinase-like [Glycine max]
COGYP_004775215.16.00E-64RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|P93194|RPK1_IPONI0Receptor-like protein kinase (Precursor)
trEMBLtr|I1NHU2|I1NHU2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33620.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000951812121609-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000095s00007012.1PF08263.7LRRNT_223644.10E-05
Glyur000095s00007012.1PF00560.28LRR_1921140.031
Glyur000095s00007012.1PF13855.1LRR_81171742.20E-09
Glyur000095s00007012.1PF13855.1LRR_81882472.60E-06
Glyur000095s00007012.1PF13855.1LRR_84985587.50E-08
Glyur000095s00007012.1PF00069.20Pkinase81710892.20E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.867
SRR1783600control0.798
SRR1783602moderate drought stress0.828
SRR1811619moderate drought stress0.807

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.339
DRR006520Root Summer glycyrrhizin high producing strain3.402
DRR006521Root Winter glycyrrhizin high producing strain4.280
DRR006522Root Winter glycyrrhizin high producing strain4.402
DRR006523Root Summer glycyrrhizin low producing strain7.591
DRR006524Root Summer glycyrrhizin low producing strain7.763
DRR006525Leaf Summer glycyrrhizin high producing strain3.484
DRR006526Leaf Summer glycyrrhizin high producing strain3.424

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.594
SRR2868004Drought Stress(Tissue:root)19.219
SRR2967015Control (Tissue:root)24.834

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.156
SRR9715740Leave43.918
SRR9715741Leave81.175
SRR9715739Root1.344
SRR9715742Root9.718
SRR9715743Root7.833

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.191
SRR8749028MeJA induced 9h28.689
SRR8749029MeJA induced 9h10.558
SRR8749030Uninduced24.484
SRR8749031Uninduced35.099
SRR8749032Uninduced24.988

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.803
SRR8400027Control-Root3.708

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved