Gene detail information of Glyur000095s00007019.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38680.1 | 2.00E-120 | 5'-nucleotidases;magnesium ion binding |
| NR | XP_004496100.1 | 0 | PREDICTED: cytosolic 5'-nucleotidase 3-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1NHU7|I1NHU7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33690.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 42918 | 48097 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01081 | E3.1.3.5 | EC:3.1.3.5 | Purine metabolism | map00230 |
| Pyrimidine metabolism | map00240 | |||
| Nicotinate and nicotinamide metabolism | map00760 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000095s00007019.1 | PF05822.7 | UMPH-1 | 41 | 300 | 1.40E-89 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.064 |
| SRR1783600 | control | 11.193 |
| SRR1783602 | moderate drought stress | 7.232 |
| SRR1811619 | moderate drought stress | 7.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.914 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.804 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.012 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.754 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.059 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.797 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.937 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.687 |
| SRR2967015 | Control (Tissue:root) | 6.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.188 |
| SRR9715740 | Leave | 22.550 |
| SRR9715741 | Leave | 11.037 |
| SRR9715739 | Root | 3.852 |
| SRR9715742 | Root | 2.742 |
| SRR9715743 | Root | 3.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.764 |
| SRR8749028 | MeJA induced 9h | 14.986 |
| SRR8749029 | MeJA induced 9h | 25.456 |
| SRR8749030 | Uninduced | 7.479 |
| SRR8749031 | Uninduced | 5.051 |
| SRR8749032 | Uninduced | 12.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.278 |
| SRR8400027 | Control-Root | 11.204 |