Gene detail information of Glyur000095s00007028.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G61580.10phosphofructokinase 4
NRXP_004496087.10PREDICTED: 6-phosphofructokinase 4, chloroplastic-like isoform X1 [Cicer arietinum]
COGYP_004625729.13.00E-123phosphofructokinase [Thermodesulfatator indicus DSM 15286]
Swissprottr|Q9FKG3|PFKA4_ARATH0ATP-dependent 6-phosphofructokinase 4, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03186} (Precursor)
trEMBLtr|I1LCJ1|I1LCJ1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G33820.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0009595206101381+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00850pfkA, PFK EC:2.7.1.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
AMPK signaling pathwaymap04152
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006002  fructose 6-phosphate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0003872  6-phosphofructokinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000095s00007028.1PF00365.15PFK1503872.40E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.222
SRR1783600control9.276
SRR1783602moderate drought stress8.262
SRR1811619moderate drought stress8.321

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.692
DRR006520Root Summer glycyrrhizin high producing strain6.976
DRR006521Root Winter glycyrrhizin high producing strain3.312
DRR006522Root Winter glycyrrhizin high producing strain3.467
DRR006523Root Summer glycyrrhizin low producing strain6.198
DRR006524Root Summer glycyrrhizin low producing strain6.217
DRR006525Leaf Summer glycyrrhizin high producing strain7.351
DRR006526Leaf Summer glycyrrhizin high producing strain7.279

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.587
SRR2868004Drought Stress(Tissue:root)23.000
SRR2967015Control (Tissue:root)21.025

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.989
SRR9715740Leave16.456
SRR9715741Leave15.150
SRR9715739Root3.914
SRR9715742Root6.938
SRR9715743Root6.062

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.910
SRR8749028MeJA induced 9h20.595
SRR8749029MeJA induced 9h13.087
SRR8749030Uninduced17.461
SRR8749031Uninduced11.712
SRR8749032Uninduced6.293

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.054
SRR8400027Control-Root21.829

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved