Gene detail information of Glyur000095s00007029.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07580.1 | 1.00E-33 | Integrase-type DNA-binding superfamily protein |
| NR | KHN00986.1 | 6.00E-92 | Ethylene-responsive transcription factor ERF106 [Glycine soja] |
| Swissprot | tr|Q9LY05|EF106_ARATH | 7.00E-42 | Ethylene-responsive transcription factor ERF106 |
| trEMBL | tr|C6SY34|C6SY34_SOYBN | 2.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00095 | 102413 | 102982 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000095s00007029.1 | PF00847.15 | AP2 | 106 | 156 | 1.30E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.188 |
| SRR1783600 | control | 0.188 |
| SRR1783602 | moderate drought stress | 1.178 |
| SRR1811619 | moderate drought stress | 1.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.342 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.578 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.142 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.105 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.786 |
| SRR2967015 | Control (Tissue:root) | 3.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 40.478 |
| SRR9715740 | Leave | 32.358 |
| SRR9715741 | Leave | 51.138 |
| SRR9715739 | Root | 1.250 |
| SRR9715742 | Root | 13.488 |
| SRR9715743 | Root | 5.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.270 |
| SRR8749028 | MeJA induced 9h | 0.692 |
| SRR8749029 | MeJA induced 9h | 0.212 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.340 |
| SRR8749032 | Uninduced | 0.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.732 |
| SRR8400027 | Control-Root | 1.248 |