Gene detail information of Glyur000095s00007046.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G09270.14.00E-42glutathione S-transferase TAU 8
NRABE86679.13.47E-119Intracellular chloride channel [Medicago truncatula]
COGYP_007096787.16.00E-20glutathione S-transferase [Chamaesiphon minutus PCC 6605]
Swissprottr|Q03664|GSTX3_TOBAC5.00E-59Probable glutathione S-transferase
trEMBLtr|Q1RSI2|Q1RSI2_MEDTR1.00E-119Intracellular chloride channel {ECO:0000313|EMBL:ABE86679.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00095179915181353+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000095s00007046.1PF13417.1GST_N_36795.00E-18
Glyur000095s00007046.1PF00043.20GST_C961874.30E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control55.975
SRR1783600control56.169
SRR1783602moderate drought stress97.408
SRR1811619moderate drought stress96.976

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain133.914
DRR006520Root Summer glycyrrhizin high producing strain132.770
DRR006521Root Winter glycyrrhizin high producing strain46.180
DRR006522Root Winter glycyrrhizin high producing strain45.699
DRR006523Root Summer glycyrrhizin low producing strain901.777
DRR006524Root Summer glycyrrhizin low producing strain905.566
DRR006525Leaf Summer glycyrrhizin high producing strain5.550
DRR006526Leaf Summer glycyrrhizin high producing strain5.530

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)350.531
SRR2868004Drought Stress(Tissue:root)1259.425
SRR2967015Control (Tissue:root)850.049

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.796
SRR9715740Leave12.225
SRR9715741Leave55.281
SRR9715739Root131.520
SRR9715742Root63.794
SRR9715743Root71.722

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h880.838
SRR8749028MeJA induced 9h973.478
SRR8749029MeJA induced 9h890.901
SRR8749030Uninduced2089.566
SRR8749031Uninduced1545.283
SRR8749032Uninduced914.039

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root172.604
SRR8400027Control-Root120.190

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved