Gene detail

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Gene detail information of Glyur000095s00007048.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G04700.1	4.00E-85	PB1 domain-containing protein tyrosine kinase
NR	XP_004496074.1	0	PREDICTED: uncharacterized protein LOC101508027 [Cicer arietinum]
COG	YP_001958461.1	1.00E-13	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q05609\|CTR1_ARATH	5.00E-25	Serine/threonine-protein kinase CTR1
trEMBL	tr\|K7LKC2\|K7LKC2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G33630.2}

Sequence

Transcript Sequence

>Glyur000095s00007048.2
ATGAGTAATGAGGATCCCAGCATTTCAGGCAAGCGATATAAAGATACAGTGAGTGTTGGGTTTAGTGACATAATCCCTTCTGATAAAGATGTAGTAGACAATATATGTTTACAGACGGGTGAAGAATTTTCTGCTGAGTTCTTACGTGATCGGGTTGCTTTAAGGAGATTTCCCGTCATAACCGATGCAGACCAGTGTTTGCCAAACAGTTTGGATTTCAATATTATTAATAATAACAATAACAATTACCAACTGGTCTATGAGGATCTAAAGCATGTTCTTGGGCTAAGGAGAAAGGATTCTGATAGTAATTCAGATTTGTCNGAGTTTGCATTAGCAAGAGGCTATGTTGCTGAAGCTGACAACATGGCTTATCCTAATAATTTNAGTAGATACCAGAGCGAACATGGTGGTATCAGACAAGCATCAGGTACATTTTCCAGACAAGCATCAGGTAAATTTTCTGAAAGATGTGATCAAGTTACTACAGGACCAAATCCTCCATCTATTTATGCCGTCGAGTCTCCTCATTCGTGCCACCCTTATGGACCAATATTGTCAGAAGGTTCTTTTTACAAGAAGATAAAGCTTTTGTGTAGTTTTGGAGGTCGAATACTACCAAGGCCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAGACACGAATTATATCAGTCAGGAAGAACATCACACGGGAGGGACTTATGAGGAAGACTTTTGCTATTTGCAATCAAACTCATATTATCAAATACCAGCTTCCTGGAGAGGATCTTGATGCTCTTATTTCTGTTTGTTCAGATGAGGATCTTCATCATATGATTGAGGAGTATGAAGAGCTTGAAAGATCTGGAGGCTCTCAACGACTTAGGATTTTTCTCATACCTTCAAATGAATTTGAGAGTCCATGTTCTGATGAATCAATAGTCAATCAGCCAAGTGATGTTGATTATCATTATGTTGTTGCTGTTAATGGTATGTTAGATCCAAGTCCACGGAAGAACCTTAGTGGACTGAGTTTGGCNAGCCATACAAGCCAGTTTGGAAATACCTCTGATTACAACAACCCACATTTCCATAGGGACTCATCCACTTATGCATTTGCTTCAGATATAAGGGACTGCAGTCCAACTTCTACAAATTTAGCAGGTGTACTCTCAAAACCTACTTCTCCATTATTAACAGCACGGAAAGCAGCAGGCAAGTCATTTAATCAAACGCCTCCTTCATCTCCCATTTATGTACANCCTAAAGATCCTAGAACTTCTAATGTACAGCTATTTACAGATCAACCATCTAATGTTGTCAATGAAAGCACTNTTCCCCTTGTTATGGAAAAAATTCCACGTGATAACTCTTTTTATGTAGACAGTACCAGTTATGTTGATCCAGTTACATACTATAATAATCTTGCACAAGGGCCTCCGTGCGTGAATTACCATCCTAGTAATCAATTAATACNGGGGTCTGACCAGGTCAGGAAGCCTAGTGATGATTTTCATTTTCANAGACGAAGCAATAGTAGAGAATTTGTCTCTCCTGCAGTTCGTAGTCAATCTGACATGATATTTGAGAGACCTTTAGTTGCTAATGAAGGTTCATATCATTTTAACAAGATTGCCTCTCATCCTGATCAGTCATCAAGTGTATTCTCAGTGTCTGATGATAGAGAGGGATCTCAGTATAGAATGTTGCATGCACTTTCAGACTCAACACTTCAGGAGAATGGTGACAACTACAAAGTTCGNTTGCAGTTTCCCCTTAATGTTGATAGAGACAAATTGTCATCACTGGAAACTTCAAGTTCTTTGGAAGAATGTTCAACACAGNCAGGAAAGATGATTGATGGGAAAGAACACTTGGCTAAATATCAAAACTTGCCCACTTTTGGAGTGACTGATAGTTGTAAGAGATTNCCAGAAATTAGTAAAGAGAACTTGCAATGTGCAGACAAAAGCATTGATTGGTTTGATGAAAAAGTTGGAGTTATGTCACAAGACAGACATTTACAGTACATCTATTACNCACATGGTGCTTGCTCATCTTCACCAGATTTACAAAGGAGTGAATGCNATGTATCTGCTCCACCATTTATCTCTTCAGAATCCACAAGAAACATGATGGAGCAACCACAAGGTATACCATTAGACACAATTGCTTCTGAGTTTTCTATGAGGAGCCAAAATTCATCAATGCATNACCAGTATGCTATGTCGGAGACAAAAGACAATCAACCACCTCCCTCTAGCTCTTTTGAGTTACAACCTATTGANTCCCAAACTAACACAAAGTCCATACTACCTATCTCATATCCAGACATGGTTTCTTATACAATAAGAGAGGTTGTTATGTCCGGTGAGGATCCTGCNTACTACCAGCACCAAAAGGAAGAAAACACAATCATTGACAAACAATCTTTTGAATACATTGATGAATTTTGCACCAACAAGCCAGAATCAATAGCTGTTGTCAAGGAGCCAATTGATTATATTTCTTCAGGTATCCAGTCACGCTTACAACTTGTCTCAAATNTAAATGAAGATGATGAAGTTGAACCTACATCTACCAAAAAAGCAGGGGTAGAGTGTGCTAATATAGAATCTGAAAGTAAGCTTGCAAAAGTTGATGATGAATACTTAAATAAGCCTACTGNTGATACAATGGCTGCTGAAGTTGAGGCTGGAATTTTTGGTTTACAGATTATTGAGAATGATGATCTTGAAGAACGACAAGAGTTNGGATCCGGAACCTTTGGAACTGTTTATCANGGAAAATGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGTAGTTGTTTCTCTGGTAGATTGTCAGAGCAAGACCGGTTGACTAAAGATTTTTGGAGAGAGGCAAAGATTCTGTCGACTCTTCACCATCCAAATGTTGTGGCATTTTATGGGGTAGTTCCAAATGGCCCAGGTGGAACATTGGCAACTGTAACAGAATACATGGTGCATGGATCATTGAGGAATGTTGGAGATTTTGGCCTATCAAGAATCAAACGCAACACACTTGTTTCTGGTGGTGTCAGNGGAACCCTTCCATGGATGGCACCGGAATTACTGGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATGTTTTCTCATTTGGCATTGCAATGTGGGAAATCTTGACTGGGGAAGAACCTTATGCTAACCTGCACTGTGGGGCTATCATAGGAGGTATTGTCAATAATACGCTTAGGCCTCCTATTCCAAAACGCTGTGATTCGGAGTGGAAAAAGTTGATGGAAGAGTGTTGGAGCCCTGATCCAGCGACCAGGCCATCCTTCACAGAAGTTAAAGACAGACTCCGCAACATGTCAGCTGCACTGCAGAAAAAGAGACATAATATTGGGAATCGGTGAAACTCACGTTTCTTGTAAATGAATGTTGGAAATACCAAAGAAAGATGGATAATAGTTGTTTCAATTGGTTAGCATTGTTTGTATAGAAACCATAGTGTAGAGAGGTA

Protein Sequence

>Glyur000095s00007048.2
MSNEDPSISGKRYKDTVSVGFSDIIPSDKDVVDNICLQTGEEFSAEFLRDRVALRRFPVITDADQCLPNSLDFNIINNNNNNYQLVYEDLKHVLGLRRKDSDSNSDLSEFALARGYVAEADNMAYPNNXSRYQSEHGGIRQASGTFSRQASGKFSERCDQVTTGPNPPSIYAVESPHSCHPYGPILSEGSFYKKIKLLCSFGGRILPRPNDGKLRYVGGETRIISVRKNITREGLMRKTFAICNQTHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERSGGSQRLRIFLIPSNEFESPCSDESIVNQPSDVDYHYVVAVNGMLDPSPRKNLSGLSLASHTSQFGNTSDYNNPHFHRDSSTYAFASDIRDCSPTSTNLAGVLSKPTSPLLTARKAAGKSFNQTPPSSPIYVXPKDPRTSNVQLFTDQPSNVVNESTXPLVMEKIPRDNSFYVDSTSYVDPVTYYNNLAQGPPCVNYHPSNQLIXGSDQVRKPSDDFHFXRRSNSREFVSPAVRSQSDMIFERPLVANEGSYHFNKIASHPDQSSSVFSVSDDREGSQYRMLHALSDSTLQENGDNYKVRLQFPLNVDRDKLSSLETSSSLEECSTQXGKMIDGKEHLAKYQNLPTFGVTDSCKRXPEISKENLQCADKSIDWFDEKVGVMSQDRHLQYIYYXHGACSSSPDLQRSECXVSAPPFISSESTRNMMEQPQGIPLDTIASEFSMRSQNSSMHXQYAMSETKDNQPPPSSSFELQPIXSQTNTKSILPISYPDMVSYTIREVVMSGEDPAYYQHQKEENTIIDKQSFEYIDEFCTNKPESIAVVKEPIDYISSGIQSRLQLVSNXNEDDEVEPTSTKKAGVECANIESESKLAKVDDEYLNKPTXDTMAAEVEAGIFGLQIIENDDLEERQEXGSGTFGTVYXGKWRGTDVAIKRIKSSCFSGRLSEQDRLTKDFWREAKILSTLHHPNVVAFYGVVPNGPGGTLATVTEYMVHGSLRNVGDFGLSRIKRNTLVSGGVXGTLPWMAPELLDGNSCRVSEKVDVFSFGIAMWEILTGEEPYANLHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPATRPSFTEVKDRLRNMSAALQKKRHNIGNR

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00095	190576	197074	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000095s00007048.2	PF00564.19	PB1	210	294	6.80E-19
Glyur000095s00007048.2	PF07714.12	Pkinase_Tyr	908	998	9.10E-14
Glyur000095s00007048.2	PF07714.12	Pkinase_Tyr	999	1113	6.50E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.364
SRR1783600	control	0.362
SRR1783602	moderate drought stress	0.845
SRR1811619	moderate drought stress	0.833

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.456
DRR006520	Root Summer glycyrrhizin high producing strain	1.476
DRR006521	Root Winter glycyrrhizin high producing strain	3.426
DRR006522	Root Winter glycyrrhizin high producing strain	3.554
DRR006523	Root Summer glycyrrhizin low producing strain	1.566
DRR006524	Root Summer glycyrrhizin low producing strain	1.556
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.186
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.212

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.685
SRR2868004	Drought Stress(Tissue:root)	0.698
SRR2967015	Control (Tissue:root)	0.925

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.091
SRR9715740	Leave	0.081
SRR9715741	Leave	0.213
SRR9715739	Root	0.071
SRR9715742	Root	0.643
SRR9715743	Root	0.262

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.945
SRR8749028	MeJA induced 9h	1.593
SRR8749029	MeJA induced 9h	0.567
SRR8749030	Uninduced	0.845
SRR8749031	Uninduced	0.783
SRR8749032	Uninduced	0.750

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.634
SRR8400027	Control-Root	1.632