Gene detail information of Glyur000095s00007065.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G48010.10receptor-like kinase in in flowers 3
NRKEH43275.10receptor-like kinase in in flowers protein [Medicago truncatula]
COGYP_003372407.12.00E-22serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|P93050|RKF3_ARATH0Probable LRR receptor-like serine/threonine-protein kinase RKF3 (Precursor)
trEMBLtr|A0A072VYY2|A0A072VYY2_MEDTR0Receptor-like kinase in in flowers protein {ECO:0000313|EMBL:KEH43275.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00095308580310484-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000095s00007065.1PF00069.20Pkinase2935002.60E-43


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.403
SRR1783600control4.244
SRR1783602moderate drought stress3.796
SRR1811619moderate drought stress3.713

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.534
DRR006520Root Summer glycyrrhizin high producing strain10.673
DRR006521Root Winter glycyrrhizin high producing strain1.697
DRR006522Root Winter glycyrrhizin high producing strain1.626
DRR006523Root Summer glycyrrhizin low producing strain20.912
DRR006524Root Summer glycyrrhizin low producing strain20.679
DRR006525Leaf Summer glycyrrhizin high producing strain5.207
DRR006526Leaf Summer glycyrrhizin high producing strain5.578

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.874
SRR2868004Drought Stress(Tissue:root)22.446
SRR2967015Control (Tissue:root)22.162

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.009
SRR9715740Leave16.270
SRR9715741Leave23.285
SRR9715739Root21.273
SRR9715742Root20.793
SRR9715743Root22.365

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.281
SRR8749028MeJA induced 9h12.144
SRR8749029MeJA induced 9h2.921
SRR8749030Uninduced4.455
SRR8749031Uninduced8.017
SRR8749032Uninduced6.867

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.002
SRR8400027Control-Root15.574

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved