Gene detail information of Glyur000096s00005901.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G49180.14.00E-89protein kinase family protein
NRKHN31124.13.90E-164Serine/threonine-protein kinase ULK3-like protein [Glycine soja]
COGYP_360177.12.00E-34serine/threonine protein kinase [Carboxydothermus hydrogenoformans Z-2901]
Swissprottr|Q5JLD8|CIPK8_ORYSJ5.00E-46CBL-interacting protein kinase 8
trEMBLtr|I1JY46|I1JY46_SOYBN3.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G39350.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000962935332705-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08269ULK1_2_3, ATG1 EC:2.7.11.1 mTOR signaling pathway map04150
Autophagy - animalmap04140
Autophagy - yeastmap04138
Mitophagy - yeastmap04139
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - wormmap04212


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000096s00005901.1PF00069.20Pkinase212695.00E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.398
SRR1783600control4.611
SRR1783602moderate drought stress12.591
SRR1811619moderate drought stress13.120

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.456
DRR006520Root Summer glycyrrhizin high producing strain7.011
DRR006521Root Winter glycyrrhizin high producing strain2.928
DRR006522Root Winter glycyrrhizin high producing strain2.979
DRR006523Root Summer glycyrrhizin low producing strain5.522
DRR006524Root Summer glycyrrhizin low producing strain5.798
DRR006525Leaf Summer glycyrrhizin high producing strain8.250
DRR006526Leaf Summer glycyrrhizin high producing strain8.352

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.783
SRR2868004Drought Stress(Tissue:root)12.185
SRR2967015Control (Tissue:root)14.142

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.294
SRR9715740Leave8.751
SRR9715741Leave8.496
SRR9715739Root2.342
SRR9715742Root3.888
SRR9715743Root4.254

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.895
SRR8749028MeJA induced 9h3.408
SRR8749029MeJA induced 9h4.386
SRR8749030Uninduced4.644
SRR8749031Uninduced2.624
SRR8749032Uninduced3.239

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.062
SRR8400027Control-Root6.837

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved