Gene detail information of Glyur000096s00005932.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01050.11.00E-97pyrophosphorylase 1
NRAFK49350.13.37E-135unknown [Lotus japonicus]
COGYP_679690.12.00E-70inorganic pyrophosphatase [Cytophaga hutchinsonii ATCC 33406]
Swissprottr|Q43187|IPYR_SOLTU4.00E-124Soluble inorganic pyrophosphatase
trEMBLtr|I3TA08|I3TA08_LOTJA1.00E-135Uncharacterized protein {ECO:0000313|EMBL:AFK49350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00096173249175789+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01507ppa EC:3.6.1.1 Oxidative phosphorylation map00190


Gene Ontology

biological_process

GO:0006796  phosphate-containing compound metabolic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0000287  magnesium ion binding

GO:0004427  inorganic diphosphatase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000096s00005932.1PF00719.14Pyrophosphatase582101.90E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.973
SRR1783600control12.330
SRR1783602moderate drought stress8.089
SRR1811619moderate drought stress7.683

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.877
DRR006520Root Summer glycyrrhizin high producing strain18.335
DRR006521Root Winter glycyrrhizin high producing strain3.102
DRR006522Root Winter glycyrrhizin high producing strain3.035
DRR006523Root Summer glycyrrhizin low producing strain34.501
DRR006524Root Summer glycyrrhizin low producing strain34.377
DRR006525Leaf Summer glycyrrhizin high producing strain33.947
DRR006526Leaf Summer glycyrrhizin high producing strain33.377

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.971
SRR2868004Drought Stress(Tissue:root)45.111
SRR2967015Control (Tissue:root)40.760

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.025
SRR9715740Leave41.418
SRR9715741Leave54.587
SRR9715739Root2.606
SRR9715742Root11.908
SRR9715743Root8.978

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.914
SRR8749028MeJA induced 9h1.096
SRR8749029MeJA induced 9h4.973
SRR8749030Uninduced1.032
SRR8749031Uninduced0.576
SRR8749032Uninduced1.718

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.060
SRR8400027Control-Root38.576

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved