Gene detail information of Glyur000096s00005947.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11480.1 | 6.00E-69 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | KHN22766.1 | 0 | Salicylate O-methyltransferase [Glycine soja] |
| COG | NP_924885.1 | 5.00E-17 | cyclopropane-fatty-acyl-phospholipid synthase [Gloeobacter violaceus PCC 7421] |
| Swissprot | tr|Q9SPV4|SAMT_CLABR | 2.00E-130 | Salicylate carboxymethyltransferase |
| trEMBL | tr|I1MNB5|I1MNB5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G24810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 251918 | 253927 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K08241 | E2.1.1.141 | EC:2.1.1.141 | alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000096s00005947.1 | PF03492.10 | Methyltransf_7 | 30 | 133 | 3.90E-33 |
| Glyur000096s00005947.1 | PF03492.10 | Methyltransf_7 | 134 | 335 | 5.60E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.963 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.075 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.042 |
| SRR2967015 | Control (Tissue:root) | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 31.754 |
| SRR9715740 | Leave | 5.223 |
| SRR9715741 | Leave | 29.486 |
| SRR9715739 | Root | 0.035 |
| SRR9715742 | Root | 0.051 |
| SRR9715743 | Root | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.008 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |