Gene detail information of Glyur000096s00005962.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66390.1 | 3.00E-137 | Peroxidase superfamily protein |
| NR | XP_004509315.1 | 0 | PREDICTED: peroxidase 72-like [Cicer arietinum] |
| Swissprot | tr|Q9FJZ9|PER72_ARATH | 0 | Peroxidase 72 (Precursor) |
| trEMBL | tr|G7LDV0|G7LDV0_MEDTR | 0 | Peroxidase family protein {ECO:0000313|EMBL:AET03865.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00096 | 310818 | 312752 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000096s00005962.1 | PF00141.18 | peroxidase | 47 | 293 | 1.40E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.964 |
| SRR1783600 | control | 8.073 |
| SRR1783602 | moderate drought stress | 10.110 |
| SRR1811619 | moderate drought stress | 10.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.285 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.387 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.979 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.940 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.583 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 119.798 |
| SRR2868004 | Drought Stress(Tissue:root) | 91.595 |
| SRR2967015 | Control (Tissue:root) | 108.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.062 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 16.576 |
| SRR9715742 | Root | 2.541 |
| SRR9715743 | Root | 5.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.258 |
| SRR8749028 | MeJA induced 9h | 1.032 |
| SRR8749029 | MeJA induced 9h | 0.053 |
| SRR8749030 | Uninduced | 10.729 |
| SRR8749031 | Uninduced | 21.448 |
| SRR8749032 | Uninduced | 2.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 23.536 |
| SRR8400027 | Control-Root | 18.885 |