Gene detail information of Glyur000097s00008293.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G71990.17.00E-160fucosyltransferase 13
NRAAS59563.10alpha 1,4-fucosyltransferase [Medicago truncatula]
Swissprottr|Q9C8W3|FUT13_ARATH0Alpha-(1,4)-fucosyltransferase
trEMBLtr|Q6Q8A9|Q6Q8A9_MEDTR0Alpha 1,4-fucosyltransferase {ECO:0000313|EMBL:AAS59563.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000973853642863-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT10


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14412FUT13, FucTC EC:2.4.1.65 Various types of N-glycan biosynthesis map00513


Gene Ontology

biological_process

GO:0006486  protein glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0008417  fucosyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000097s00008293.1PF00852.14Glyco_transf_102264384.90E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.797
SRR1783600control14.168
SRR1783602moderate drought stress11.227
SRR1811619moderate drought stress11.265

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.091
DRR006520Root Summer glycyrrhizin high producing strain15.802
DRR006521Root Winter glycyrrhizin high producing strain15.617
DRR006522Root Winter glycyrrhizin high producing strain15.264
DRR006523Root Summer glycyrrhizin low producing strain16.660
DRR006524Root Summer glycyrrhizin low producing strain16.695
DRR006525Leaf Summer glycyrrhizin high producing strain14.739
DRR006526Leaf Summer glycyrrhizin high producing strain14.566

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.724
SRR2868004Drought Stress(Tissue:root)32.775
SRR2967015Control (Tissue:root)28.797

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.784
SRR9715740Leave19.556
SRR9715741Leave22.014
SRR9715739Root17.450
SRR9715742Root16.575
SRR9715743Root15.534

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.127
SRR8749028MeJA induced 9h32.352
SRR8749029MeJA induced 9h29.630
SRR8749030Uninduced34.834
SRR8749031Uninduced35.867
SRR8749032Uninduced23.405

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.533
SRR8400027Control-Root19.957

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved